ClinicalTrials.gg
RecruitingNCT05269381PNeoVCAUpdated Aug 20, 2026

Personalized Neoantigen Peptide-Based Vaccine in Combination With Pembrolizumab for Treatment of Advanced Solid Tumors

A Phase 1/2 interventional study of Cyclophosphamide and Neoantigen Peptide Vaccine in Anatomic Stage III Breast Cancer AJCC v8, Anatomic Stage IIIA Breast Cancer AJCC v8 and Anatomic Stage IIIB Breast Cancer AJCC v8, sponsored by Mayo Clinic. Recruiting at 1 site in United States. Open to participants aged 16 Years and older. Per ClinicalTrials.gov, last updated 2026-08-20.

Sponsored by Mayo Clinic · Phase 1/2, Interventional, and Treatment

From the registry’s dates

  • Started Mar 2022; still recruiting 4 years 7 months later.
Phase
Phase 1/2
Study type
Interventional
Enrollment
138
Allocation
Non-randomized
Ages
16 Years and older
Sex
All
01

Study summary

This phase I/II trial tests the safety and tolerability of an experimental personalized vaccine when given by itself and with pembrolizumab in treating patients with solid tumor cancers that have spread to other places in the body (advanced). The experimental vaccine is designed target certain proteins (neoantigens) on individuals' tumor cells. Immunotherapy with monoclonal antibodies, such as pembrolizumab, may help the body's immune system attack the cancer, and may interfere with the ability of tumor cells to grow and spread. Giving the personalized neoantigen peptide-based vaccine with pembrolizumab may be safe and effective in treating patients with advanced solid tumors.

Read the detailed description

PRIMARY OBJECTIVE:

I. To evaluate the safety of personalized neoantigen peptide vaccine in combination with pembrolizumab in advanced solid cancers. (Phase I and Pilot Cohort 5) II. To evaluate and estimate 24-months event-free survival (EFS) rate per Kaplan-Meier method in triple-negative breast cancer (TNBC) patients with residual cancer burden-2 and 3 (RCB-2 and RCB-3) after neoadjuvant pembrolizumab-based chemotherapy treated with neoantigen vaccine in combination with pembrolizumab. (Phase II Cohort 3) III. To evaluate and estimate 24-months event-free survival (DFS) rate per Kaplan-Meier method in stage II/III non-small cell lung cancer (NSCLC) patients after surgery treated with neoantigen vaccine in combination with pembrolizumab. (Phase II Cohort 4)

SECONDARY OBJECTIVES:

I. To evaluate and estimate the immunogenicity response rate in patients with advanced solid cancers receiving personalized neoantigen peptide vaccine in combination with pembrolizumab. (Phase I and Pilot Cohort 5) II. To obtain preliminary information on the immunogenicity of neoantigen in induction of specific cellular immune responses and humoral immune response.

III. To evaluate and estimate the immunogenicity response rate in TNBC patients with residual cancer burden-2 and 3 (RCB-2 and RCB-3) after neoadjuvant pembrolizumab-based chemotherapy treated with neoantigen vaccine in combination with pembrolizumab. (Phase II Cohort 3) IV. To evaluate adverse event profile in in TNBC patients with residual cancer burden-2 and 3 (RCB-2 and RCB-3) after neoadjuvant pembrolizumab-based chemotherapy treated with neoantigen vaccine in combination with pembrolizumab. (Phase II Cohort 3) V. To evaluate and estimate the vaccine immunogenicity response rate in stage II/III NSCLC patients after surgery treated with neoantigen vaccine in combination with pembrolizumab. (Phase II Cohort 4) VI. To evaluate adverse event profile in stage II/III NSCLC patients after surgery treated with neoantigen vaccine in combination with pembrolizumab. (Phase II Cohort 4)

EXPLORATORY OBJECTIVES:

I. To obtain preliminary information on the immunogenicity of neoantigen in induction of specific cellular immune responses and humoral immune response in patients with selected advanced solid tumors. (Phase I and Pilot Cohort 5) II. To obtain preliminary estimates of efficacy as measured by objective response rate (ORR based on Response Evaluation Criteria in Solid Tumors [RECIST]) of personalized neoantigen peptide vaccine and pembrolizumab in patients with selected advanced solid tumors. (Phase I and Pilot Cohort 5) III. To obtain preliminary information of immunity persistence, as well as pre-existing immunity in patients with selected advanced solid tumors. (Phase I and Pilot Cohort 5) IV. To obtain preliminary information on the immunogenicity of neoantigen in induction of specific cellular immune responses and humoral immune response in Cohort 1 (TNBC patients with RCB-2 and RCB-3) and 2 (stage II/III NSCLC patients) separately. (Phase II) V. To obtain preliminary information of immunity persistence, as well as pre-existing immunity in Cohort 1 (TNBC patients with RCB-2 and RCB-3) and 2 (stage II/III NSCLC patients) separately. (Phase II)

OUTLINE: This is a phase I, dose-escalation study of personalized neoantigen vaccine followed by a phase II study. Patients are assigned to 1 of 5 cohorts.

COHORT 1: Patients receive cyclophosphamide intravenously (IV) on day -3. Patients then receive personalized neoantigen vaccine with sargramostim (GM-CSF) subcutaneously (SC) on days 1, 4, 8, and 15 of cycle 1 and on day 1 of cycle 2 in the absence of disease progression or unacceptable toxicity.

COHORT 2: Patients receive cyclophosphamide IV on day -3. Patients then receive personalized neoantigen vaccine with GM-CSF SC on days 1, 4, 8, and 15 of cycle 1 and then on day 1 of cycles 2, 5, and 8. Patients also receive pembrolizumab IV over 30 minutes on day 1 of each cycle. Cycles repeat every 21 days for up to 2 years in the absence of disease progression or unacceptable toxicity.

COHORT 3: Patients with TNBC receive cyclophosphamide IV on day -3. Patients then receive personalized neoantigen vaccine with GM-CSF SC on days 1, 4, 8, and 15 of cycle 1 and then on day 1 of cycles 2, 5, and 8. Patients also receive pembrolizumab IV over 30 minutes on day 1 of each cycle or as clinically indicated. Cycles repeat every 21 days in the absence of disease progression or unacceptable toxicity.

COHORT 4: Patients with NSCLC receive cyclophosphamide IV on day -3. Patients then receive personalized neoantigen vaccine with GM-CSF SC on days 1, 4, 8, and 15 of cycle 1 and then on day 1 of cycles 2, 5, and 8. Patients also receive pembrolizumab IV over 30 minutes on day 1 of each cycle or as clinically indicated. Cycles repeat every 21 days in the absence of disease progression or unacceptable toxicity.

PILOT COHORT 5: Patients with ILC receive cyclophosphamide IV on day -3. Patients then receive personalized neoantigen vaccine with GM-CSF SC on days 1, 4, 8, and 15 of cycle 1 and then on day 1 of cycles 2, 5, and 8. Patients also receive pembroblizumab IV on day of each cycle or as clinically indicated. Cycles repeat every 21 days in the absence of disease progression or unacceptable toxicity.

All patients may undergo tumor biopsy throughout the study. Additionally, patients undergo blood sample collection as well as computed tomography (CT) or magnetic resonance imaging (MRI) throughout the study.

After completion of study treatment, patients are followed up at 30 days and then every 3 months up to 2 years from study enrollment.

02

Conditions studied

  • Anatomic Stage III Breast Cancer AJCC v8
  • Anatomic Stage IIIA Breast Cancer AJCC v8
  • Anatomic Stage IIIB Breast Cancer AJCC v8
  • Anatomic Stage IIIC Breast Cancer AJCC v8
  • Anatomic Stage IV Breast Cancer AJCC v8
  • Clinical Stage III Cutaneous Melanoma AJCC v8
  • Clinical Stage III Gastric Cancer AJCC v8
  • Clinical Stage III Gastroesophageal Junction Adenocarcinoma AJCC v8
  • Clinical Stage III Merkel Cell Carcinoma AJCC v8
  • Clinical Stage IV Cutaneous Melanoma AJCC v8
  • Clinical Stage IV Gastric Cancer AJCC v8
  • Clinical Stage IV Gastroesophageal Junction Adenocarcinoma AJCC v8
  • Clinical Stage IV Merkel Cell Carcinoma AJCC v8
  • Clinical Stage IVA Gastric Cancer AJCC v8
  • Clinical Stage IVA Gastroesophageal Junction Adenocarcinoma AJCC v8
  • Clinical Stage IVB Gastric Cancer AJCC v8
  • Clinical Stage IVB Gastroesophageal Junction Adenocarcinoma AJCC v8
  • Locally Advanced Cervical Carcinoma
  • Locally Advanced Endometrial Carcinoma
  • Locally Advanced Gastric Adenocarcinoma
  • Locally Advanced Gastroesophageal Junction Adenocarcinoma
  • Locally Advanced Head and Neck Squamous Cell Carcinoma
  • Locally Advanced Hepatocellular Carcinoma
  • Locally Advanced Lung Non-Small Cell Carcinoma
  • Locally Advanced Malignant Solid Neoplasm
  • Locally Advanced Melanoma
  • Locally Advanced Merkel Cell Carcinoma
  • Locally Advanced Renal Cell Carcinoma
  • Locally Advanced Skin Squamous Cell Carcinoma
  • Locally Advanced Triple-Negative Breast Carcinoma
  • Locally Advanced Unresectable Breast Carcinoma
  • Locally Advanced Unresectable Cervical Carcinoma
  • Locally Advanced Unresectable Gastric Adenocarcinoma
  • Locally Advanced Unresectable Gastroesophageal Junction Adenocarcinoma
  • Locally Advanced Unresectable Renal Cell Carcinoma
  • Locally Advanced Urothelial Carcinoma
  • Metastatic Cervical Carcinoma
  • Metastatic Endometrial Carcinoma
  • Metastatic Gastric Adenocarcinoma
  • Metastatic Gastroesophageal Junction Adenocarcinoma
  • Metastatic Head and Neck Squamous Cell Carcinoma
  • Metastatic Hepatocellular Carcinoma
  • Metastatic Lung Non-Small Cell Carcinoma
  • Metastatic Malignant Solid Neoplasm
  • Metastatic Melanoma
  • Metastatic Merkel Cell Carcinoma
  • Metastatic Renal Cell Carcinoma
  • Metastatic Skin Squamous Cell Carcinoma
  • Metastatic Triple-Negative Breast Carcinoma
  • Metastatic Urothelial Carcinoma
  • Skin Squamous Cell Carcinoma
  • Stage III Cervical Cancer AJCC v8
  • Stage III Hepatocellular Carcinoma AJCC v8
  • Stage III Lung Cancer AJCC v8
  • Stage III Renal Cell Cancer AJCC v8
  • Stage IIIA Cervical Cancer AJCC v8
  • Stage IIIA Hepatocellular Carcinoma AJCC v8
  • Stage IIIA Lung Cancer AJCC v8
  • Stage IIIA Uterine Corpus Cancer AJCC v8
  • Stage IIIB Cervical Cancer AJCC v8
  • Stage IIIB Hepatocellular Carcinoma AJCC v8
  • Stage IIIB Lung Cancer AJCC v8
  • Stage IIIB Uterine Corpus Cancer AJCC v8
  • Stage IIIC Lung Cancer AJCC v8
  • Stage IIIC Uterine Corpus Cancer AJCC v8
  • Stage IIIC1 Uterine Corpus Cancer AJCC v8
  • Stage IIIC2 Uterine Corpus Cancer AJCC v8
  • Stage IV Cervical Cancer AJCC v8
  • Stage IV Cutaneous Squamous Cell Carcinoma of the Head and Neck AJCC v8
  • Stage IV Hepatocellular Carcinoma AJCC v8
  • Stage IV Lung Cancer AJCC v8
  • Stage IV Renal Cell Cancer AJCC v8
  • Stage IVA Cervical Cancer AJCC v8
  • Stage IVA Hepatocellular Carcinoma AJCC v8
  • Stage IVA Lung Cancer AJCC v8
  • Stage IVA Uterine Corpus Cancer AJCC v8
  • Stage IVB Cervical Cancer AJCC v8
  • Stage IVB Hepatocellular Carcinoma AJCC v8
  • Stage IVB Lung Cancer AJCC v8
  • Stage IVB Uterine Corpus Cancer AJCC v8
  • Triple-Negative Breast Carcinoma
  • Unresectable Cervical Carcinoma
  • Unresectable Endometrial Carcinoma
  • Unresectable Gastric Adenocarcinoma
  • Unresectable Gastroesophageal Junction Adenocarcinoma
  • Unresectable Head and Neck Squamous Cell Carcinoma
  • Unresectable Hepatocellular Carcinoma
  • Unresectable Lung Non-Small Cell Carcinoma
  • Unresectable Malignant Solid Neoplasm
  • Unresectable Melanoma
  • Unresectable Merkel Cell Carcinoma
  • Unresectable Renal Cell Carcinoma
  • Unresectable Skin Squamous Cell Carcinoma
  • Unresectable Triple-Negative Breast Carcinoma
  • Unresectable Urothelial Carcinoma
  • Breast Adenocarcinoma
  • Stage III Uterine Corpus Carcinoma or Carcinosarcoma AJCC v8
  • Stage IV Uterine Corpus Carcinoma or Carcinosarcoma AJCC v8
  • Stage III Head and Neck Cutaneous Squamous Cell Carcinoma AJCC v8
  • Stage IV Head and Neck Cutaneous Squamous Cell Carcinoma AJCC v8
  • Invasive Breast Lobular Carcinoma
03

In context

Uterine Cervical Neoplasms

2,366 studies on the registry are indexed under Uterine Cervical Neoplasms; 677 are open to participants now.

This study's planned enrollment of 138 is above the median of 100 across 1,738 interventional studies indexed under Uterine Cervical Neoplasms.

Browse Uterine Cervical Neoplasms studies →

Lead sponsor

Mayo Clinic is the lead sponsor of 3,269 studies on the registry; 672 are open to participants now.

Of its 452 completed or terminated interventional studies of FDA-regulated products, 321 (71%) have results posted.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
16 Years and older
Sexes eligible
All
Accepts healthy volunteers
No

Eligibility criteria

Inclusion Criteria COHORT 1 and COHORT 2 are no longer enrolling.

PHASE I PRE-REGISTRATION, ALL:

  • Willing to provide tissue specimens per protocol, or have clinically collected formalin-fixed paraffin-embedded (FFPE) tissue blocks, or available sequencing data available from commercial or research tests

    • NOTE 1: Includes fresh tissue specimen at pre-registration, or with or clinically collected FFPE tissue blocks for complete exome and transcriptome sequencing. Patients who had tumor sequencing under certain Mayo IRB protocols and neoantigen has been identified or REAL Neo vaccine produced are allowed to proceed to pre-registration and/or registration.
    • NOTE 2: This criteria will not apply to patients who had sequencing and neoantigen prediction previously completed.
  • as defined by (v 1.1) criteria or non-measurable disease

    • NOTE: Tumor lesions in previously irradiated area are not considered measurable disease
  • Patients with actionable genomic abnormality including, but not limited to EGFR, ALK, MET, ROS-1, RET, NTRK, KRAS or BRAF must have received and progressed on at least one line of prior FDA-approved targeted therapy
  • Provide written . For pediatric patients (age 16-17 years):

    • Written informed consent from legal guardian(s) and/or child obtained in accordance with local regulations.
  • Willing to return to enrolling institution for follow-up
  • Willing to provide blood specimens for research
  • Negative pregnancy test 7 days prior to pre-registration for persons of .
  • Willing to employ highly effective method of from pre-registration through 6 months after final vaccine cycle
  • Willing to receive tetanus vaccination if subject has not had one ≤ 1 year prior to pre-registration
  • (ECOG) Performance Status (PS) of 0 or 1
  • Anticipated > 6 months
  • Recovered from all toxicities associated with prior treatment to acceptable baseline status (see specified inclusion limits for laboratory toxicity) or National Cancer Institute (NCI) (CTCAE) v5 Grade 0 or 1, except for toxicities not considered safety risk per treating investigator (e.g., alopecia or vitiligo).
  • The following lab values obtained ≤ 28 days prior to pre-registration:

    • ≥ 9.0 g/dL (Must be ≥ 7 days after most recent transfusion)
    • (ANC) ≥ 1500/mm\^3 or ≥ 1.5 X 10\^9/L
    • count ≥ 100,000/mm\^3 or ≥ 100 X 10\^9/L (Must be ≥7 days after most recent transfusion)
    • Total ≤ 1.5 x (ULN)
    • (AST) and alanine transaminase (ALT) ≤ 3 x ULN or ≤ 5 x ULN with liver
    • Creatinine ≤ 1.5 x ULN OR calculated must be ≥ 50 ml/min using Cockcroft-Gault formula
    • (INR) or prothrombin time (PT) and activated partial thromboplastin time (aPTT) ≤ 1.5 x ULN unless patient is receiving anticoagulant therapy in which case PT or PTT must be within target range of therapy

PHASE I REGISTRATION, ALL:

  • Successful sequencing and production of REAL-Neo vaccine
  • Measurable disease as defined by RECIST (v 1.1) criteria or non-measurable disease

    • NOTE: Tumor lesions in previously irradiated area are not considered measurable disease
  • ECOG PS 0 or 1
  • Anticipated life expectancy > 6 months
  • The following lab values obtained ≤ 14 days prior to registration:

    • Hemoglobin ≥ 9.0 g/dl
    • ANC ≥ 1500/mm\^3
    • Platelet count ≥ 100,000/mm\^3
    • Total bilirubin ≤ 1.5 x ULN
    • ALT and AST ≤ 3 x ULN (≤ 5 x ULN with liver involvement)
    • PT/INR and aPTT ≤ 1.5 x ULN unless patient is receiving anticoagulant therapy in which case INR or aPTT must be within target range of therapy
    • Calculated creatinine clearance ≥ 50 ml/min using Cockcroft-Gault formula
  • Provide written informed consent
  • Willing to provide blood and tissue specimens for research
  • Willing to return to enrolling institution for follow-up
  • Patients with actionable genomic abnormality including, but not limited to EGFR, ALK, MET, ROS-1, RET, NTRK, KRAS or BRAF must have also received and progressed on at least one line of prior FDA-approved targeted therapy
  • Negative pregnancy test ≤ 14 days prior to registration for persons of childbearing potential only

    • NOTE: If urine test cannot be confirmed negative, serum pregnancy test will be required
  • Willing to employ highly effective method of contraception from pre-registration through 6 months after final vaccine cycle
  • Willing to receive tetanus vaccination if subject has not had one ≤ 1 year prior to pre-registration
  • Recovered from all toxicities associated with prior treatment to acceptable baseline status or NCI CTCAE v5 Grade of 0 or 1, except for toxicities not considered safety risk per treating investigator (e.g., alopecia or vitiligo)

PHASE II PRE-SCREENING COHORT 3 ONLY:

  • ECOG PS 0 or 1
  • Histological confirmation of adenocarcinoma of the breast with estrogen receptor (ER) \< 10%, progesterone receptor (PR) \< 10%, and negative based on current American Society of Clinical Oncology (ASCO)/College of American Pathologists (CAP) guideline
  • Stage I-III based on 7th edition of TNM staging system from American Joint Committee on Cancer (AJCC)
  • Evidence of residual disease ≥ 1 cm after pembrolizumab-based chemotherapy on imaging for patients who have not had surgery
  • Willing to proceed with surgery and provide tissue and blood specimens for patients who have not had surgery, willing to provide clinically collected FFPE tissue blocks, or willing to provide available sequencing data available from commercial or research test
  • Provide written informed consent
  • Willing to return to enrolling institution for follow-up

PHASE II PRE-SCREENING COHORT 4 ONLY:

  • ECOG PS 0 or 1
  • Histological confirmation of lung NSCLC
  • No actionable EGFR mutations and ALK fusions
  • Stage II or stage III based on AJCC 8th
  • Tumor ≥ 2 cm on pre-surgery evaluation imaging (residual disease ≥ 2 cm after neoadjuvant therapy on pre-surgery evaluation imaging in patient who receives neoadjuvant therapy) for patients who have not had surgery. Patients with or without neoadjuvant chemotherapy or immunotherapy are allowed
  • Provide written informed consent
  • Willing to proceed with surgery and provide tissue and blood specimens for patients who have not had surgery
  • Willing to return to enrolling institution for follow-up

PHASE II PRE-REGISTRATION COHORT 3 (TNBC) ONLY:

  • confirmed residual cancer burden 2 and 3 in surgical specimens

PHASE II PRE-REGISTRATION COHORT 4 (NSCLC) ONLY:

  • Tumor without complete pathologic response is confirmed in pathology
  • Willing to employ highly effective method of contraception from pre-registration through 6 months after final vaccine cycle
  • ECOG PS of 0 or 1
  • Anticipated life expectancy > 6 months

PHASE II PRE-REGISTRATION PILOT AND COHORT 5:

  • Provide written informed consent. For pediatric patients (age 16-17 years):

    • Written informed consent from legal guardian(s) and/or child obtained in accordance with local regulations
  • Willing to proceed with surgery and provide mandatory tissue specimens or previously collected FFPE tissues for complete exome and transcriptome sequencing or available sequencing data available from commercial or research test

    • NOTE: Patients who had sequencing under Mayo IRB protocol #13-000942, #14-004094, or #21-007742 and neoantigens have been identified or REAL Neo vaccine produced are allowed to proceed to pre-registration and/or registration
  • Negative pregnancy test done ≤ 7 days prior to pre-registration for persons of childbearing potential only

    • NOTE: If the urine test is positive or cannot be confirmed as negative, a serum pregnancy test will be required
  • Willing to employ a highly effective method of contraception from the time of preregistration through 6 months after the final vaccine cycle
  • ECOG performance status of 0 or 1
  • Anticipated life expectancy of > 6 months
  • Willing to return to enrolling institution for follow-up

PHASE II PRE-REGISTRATION COHORT 5 (ILC) ONLY:

  • Histologically confirmed invasive lobular carcinoma or other histology with lobular features

    • Histological confirmation of adenocarcinoma of the breast with invasive lobular histology or other histology with lobular features with any estrogen receptor (ER), progesterone receptor (PR), and HER2 status
    • Stage II-IV based on the 7th edition of TNM staging system from AJCC
    • Tumor mutational burden ≥ 10 muts/Mb either in tissue or blood

PHASE II AND PILOT COHORT 5 REGISTRATION:

  • Successful sequencing and production of REAL-Neo vaccine
  • Patients will receive ≥ 2 additional cycles of maintenance pembrolizumab
  • ECOG PS 0 or 1
  • Anticipated life expectancy > 6 months
  • Lab values as per Phase I registration criteria obtained ≤ 14 days prior to registration:
  • Provide written informed consent
  • Willing to provide blood specimens for research
  • Willing to return to enrolling institution for follow-up
  • Negative pregnancy test ≤ 14 days prior to registration for persons of childbearing potential only. If urine test cannot be confirmed negative, serum pregnancy test will be required.
  • Willing to employ highly effective method of contraception from pre-registration through 6 months after final vaccine cycle
  • Willing to receive tetanus vaccination if subject has not had one ≤ 1 year prior registration
  • Recovered from all toxicities associated with prior treatment to acceptable baseline status NCI CTCAE v5 grade of 0 or 1, except for toxicities not considered safety risk per treating investigator (e.g., alopecia or vitiligo)

Exclusion Criteria

ALL PHASES:

  • Any of the following because study involves agent whose genotoxic, mutagenic and teratogenic effects on developing fetus and newborn are unknown:

    • Pregnant person
    • Nursing person unwilling to stop breast feeding
    • Person of childbearing potential unwilling to employ adequate contraception from registration through 6 months after final vaccine cycle
  • Co-morbid systemic illnesses or other severe concurrent disease which, in judgment of investigator, would make patient inappropriate for entry into this study or interfere significantly with proper assessment of safety and toxicity of prescribed regimens
  • History of myocardial infarction ≤ 6 months prior to pre-registration, or congestive heart failure requiring use of ongoing maintenance therapy for life-threatening ventricular arrhythmias.
  • patients and patients known to be (HIV) positive and currently receiving antiretroviral therapy

PHASE I PRE-REGISTRATION:

  • Acute, reversible effect(s) of prior therapy not recovered to baseline regardless of interval since last treatment
  • Uncontrolled illness including, but not limited to:

    • Ongoing or active infection
    • Psychiatric illness/social situations
    • Congestive heart failure with (NYHA) class III or IV moderate to severe objective evidence of cardiovascular disease
    • Stroke ≤ 3 months prior to pre-registration
    • Significant cardiac arrhythmia or unstable angina
    • Any other conditions that would limit compliance with study requirements
  • Receiving any other investigational agent which would be considered treatment for primary neoplasm, except pembrolizumab
  • Any prior or adverse reaction to GM-CSF
  • Other active ≤ 3 years prior to pre-registration

    • EXCEPTIONS: Non-melanotic skin cancer or carcinoma-in-situ of the cervix
    • NOTE: If there is history of prior malignancy, they must not be receiving other specific treatment for their cancer
  • History of active disease (AD) that required systemic treatment in ≤ 30 days (i.e., use of disease modifying agents, > 10 mg daily prednisone equivalent, or other immunosuppressive drugs) prior to pre-registration

    • NOTE: Replacement therapy (e.g., thyroxine, insulin, or physiologic corticosteroid replacement therapy for adrenal or pituitary insufficiency) is not considered systemic treatment. Patients with vitiligo, Graves disease, or psoriasis not requiring systemic treatment within the past 30 days are not excluded. Patients with celiac disease controlled with diet modification are not excluded PHASE I REGISTRATION
  • Any of the following prior therapies:

    • Chemotherapy, experimental drugs (except pembrolizumab), or small molecules inhibitors (except for endocrine therapies) ≤ 3 weeks prior to cycle 1 day 1 (C1D1) neoantigen vaccinations
    • Radiation ≤ 2 weeks prior to C1D1 neoantigen vaccinations
    • Major Surgery ≤ 4 weeks prior to C1D1 neoantigen vaccinations
    • Received ≤ 30 days prior to C1D1 neoantigen vaccinations
    • NOTE: Palliative radiation therapy for symptoms control including, but not limited to, bone metastatic lesion radiation therapy is allowed, but last dose of radiation therapy should be > 14 days from first dose of vaccination on study
  • CTCAE ≥ Grade 3 treatment-emergent adverse event (TEAE) to prior , TEAE requiring systemic corticosteroids (> 10 mg daily prednisone equivalent), or permanent treatment discontinuation due to toxicity
  • Neuromuscular disorders (e.g. inflammatory myopathies, muscular dystrophy, amyotrophic lateral sclerosis and spinal muscular atrophy) or history of rhabdomyolysis
  • Active ADs that require chronic systemic steroids (> 10 mg daily prednisone equivalent) or immunosuppressive agents
  • Systemic corticosteroids (> 10 mg daily prednisone equivalent) or other immunosuppressive medications ≤ 14 days prior to registration

    • NOTE: Inhaled or topical steroids and adrenal replacement steroid doses > 10 mg daily prednisone equivalent permitted in absence of active AD
  • Patients will also be excluded based on tissue/RNA/DNA quality and quantity. If any of the following quality and quantity thresholds are not met, the patient will be excluded:

    • Tumor tissue cellularity ≥ 30%
    • Sufficient tissue (fresh frozen or FFPE) for both DNA and RNA sequencing with passing cellularity.
    • ≥ 30% of tumor RNA with fragment sizes are ≥ 200 base pairs (DV200 ≥ 30)
    • \< 10% of DNA fragments are smaller than 1 kb
    • Sufficient amount of both DNA (blood and tumor) and RNA (tumor) for exome sequencing and RNAseq according to the Mayo sequencing core (note: kits and technologies change over time, so these are not fixed numbers)
  • Evidence of or central nervous system metastases that are untreated, symptomatic, or require steroids >10 mg daily prednisone equivalent

    • NOTE: Patients with history of stable treated are eligible. Stable treated metastases defined as no evidence of progression for ≥4 weeks on brain imaging (MRI or CT scan)

PHASE II PRE-SCREENING:

  • Uncontrolled illness including, but not limited to:

    • Ongoing or active infection
    • CHF with NYHA class III or IV; moderate to severe objective evidence of cardiovascular disease
    • Significant cardiac arrhythmia or unstable angina
    • Any other conditions that would limit compliance with study requirements
  • Any prior hypersensitivity or adverse reaction to GM-CSF
  • Other active malignancy ≤ 3 years prior to pre-screening

    • EXCEPTIONS: Non-melanotic skin cancer or carcinoma-in-situ of the cervix
    • NOTE: If there is history of prior malignancy, they must not be receiving other specific treatment for their cancer
  • Known history of active AD that has required systemic treatment in the ≤ 30 days (i.e., with use of disease modifying agents, corticosteroids, or immunosuppressive drugs) prior to pre-screening

    • NOTE: Replacement therapy (e.g., thyroxine, insulin, or physiologic corticosteroid replacement therapy for adrenal or pituitary insufficiency) is not considered systemic treatment. Patients with vitiligo, Graves' disease, or psoriasis not requiring systemic treatment within the past 30 days are not excluded. Patients with Celiac disease controlled with diet modification are not excluded.

PHASE II PRE-REGISTRATION

  • Uncontrolled illness including, but not limited to:

    • Congestive heart failure with NYHA class III or IV; moderate to severe objective evidence of cardiovascular disease
    • Significant cardiac arrhythmia or unstable angina
    • Any other conditions that would limit compliance with study requirements
  • Any prior hypersensitivity or adverse reaction to GM-CSF
  • Other active malignancy ≤ 3 years prior to pre-registration

    • EXCEPTIONS: Non-melanotic skin cancer or carcinoma-in-situ of the cervix
    • NOTE: If history of prior malignancy, must not be receiving other specific treatment for cancer
  • Known history of active AD that has required systemic treatment in the ≤ 30 days (i.e., with use of disease modifying agents, corticosteroids > 10 mg daily prednisone equivalent, or other immunosuppressive drugs) prior to pre-registration

    • NOTE: Replacement therapy (e.g., thyroxine, insulin, or physiologic corticosteroid therapy for adrenal or pituitary insufficiency) is not considered systemic treatment. Patients with vitiligo, Graves' disease, or psoriasis not requiring systemic treatment within the past 30 days are not excluded. Patients with Celiac disease controlled with diet modification are not excluded.
  • Patients will also be excluded based on tissue/RNA/DNA quality and quantity. If any of the following quality and quantity thresholds are not met, patient will be excluded: (1) tumor tissue cellularity equal to or greater than 30%; (2) there are ≥ 2 cores with passing cellularity; (3) ≥ 30% of tumor RNA with fragment sizes are ≥ 200 base pairs (DV200 ≥ 30); (4) \< 10% of DNA fragments are smaller than 1 kb; and (5) sufficient amount of both DNA (blood and tumor) and RNA (tumor) for exome sequencing and whole transcriptome sequencing (RNAseq) according to Mayo sequencing core. (Kits and technologies change overtime, so these are not fixed numbers.)

PHASE II REGISTRATION

  • Evidence of metastatic disease or recurrence
  • Any of the following prior therapies:

    • Chemotherapy, experimental drugs (except pembrolizumab), or small molecules inhibitors (except for endocrine therapies) ≤ 3 weeks prior to study treatment
    • Radiation ≤ 2 weeks prior to study treatment
    • Major surgery ≤ 4 weeks prior to study treatment
    • Received live vaccine ≤ 30 days prior to study treatment

      • NOTE: Continuation of pembrolizumab per standard of care is allowed
      • NOTE: Palliative radiation therapy for symptoms control including, but not limited to, bone metastatic lesion radiation therapy is allowed, but last dose of radiation therapy should be > 14 days from first dose of vaccination on study
  • CTCAE ≥ grade 3 TEAE to prior checkpoint inhibitor, TEAE requiring systemic corticosteroids (> 10 mg daily prednisone equivalent), or permanent treatment discontinuation due to toxicity
  • Neuromuscular disorders (e.g., inflammatory myopathies, muscular dystrophy, amyotrophic lateral sclerosis and spinal muscular atrophy), or history of rhabdomyolysis
  • Active ADs that require chronic systemic steroids (> 10 mg daily prednisone equivalent) or immunosuppressive agents

Other inclusion/exclusion criteria as indicated per protocol not listed here due to limitation in number of characters (text) allowed.

Terms in these criteria, in plain language(32)

Underlined terms in the criteria open these too. Explained by clinicaltrials.gg, not part of the registry record. The study team decides who can take part.

Measurable disease

The amount of disease can be tracked with a defined measurement, so the study can see whether it shrinks or grows. It might be a tumour measured on a scan or, in some blood cancers such as myeloma, a marker measured in blood or urine.

The criteria or the study team say which measurement counts — having no tumour visible on a scan does not by itself rule you out.

RECIST

The standard rules for measuring tumours on CT or MRI scans, to tell whether a cancer is shrinking, stable or growing during treatment.

“Measurable disease per RECIST 1.1” usually means at least one tumour 10 mm or more at its longest on a CT scan, or a lymph node 15 mm or more across its short axis.

Informed consent

Before you join, the study team explains what taking part involves — its purpose, what happens, the risks and possible benefits — and answers your questions, so you can decide freely. Consent is usually recorded on a form (the informed consent form, ICF) signed by you or, where the law allows, by someone legally authorised to decide for you.

You can keep asking questions during the study, you are told of new information that matters, and you can choose to leave at any time.

Childbearing potential

Able to become pregnant: from the first period until menopause, unless permanently unable to through surgery (removal of the womb, or of both ovaries or both fallopian tubes).

Criteria for people of childbearing potential usually ask for a negative pregnancy test and for contraception during the study and for a time after it.

Contraception

Ways of preventing pregnancy. “Highly effective” methods fail less than 1% of the time a year when used correctly — for example an IUD or an implant.

Criteria usually say which methods count and how long to keep using them after the last dose, sometimes for male participants too. Some studies accept a partner’s vasectomy if it was confirmed successful and that person is the participant’s only sexual partner.

ECOG performance status

A scale of how much an illness limits everyday activity. For people being assessed to join a study, scores run from 0 (fully active) to 4; lower is more active.

0
Fully active, no restrictions.
1
Limited in strenuous activity, but walking and able to do light work, such as housework or office work.
2
Walking and able to look after yourself, but unable to work; up and about more than half of waking hours.
3
Able to look after yourself only in part; in bed or a chair more than half of waking hours.
4
Unable to look after yourself at all; in bed or a chair all day.

Studies most often ask for 0–1 or 0–2. Your doctor gives the score; the WHO scale uses the same steps. The full scale also has 5, which records death.

Life expectancy

The study doctor’s estimate of how long someone is likely to live. Criteria use it so that people can stay in the study long enough for it to answer its question.

CTCAE grade

The US National Cancer Institute’s scale of how severe an adverse event is — any unwanted medical event during a study, such as a symptom, an illness or an abnormal test result, whether or not a treatment caused it. Whether it did is judged separately.

1
Mild.
2
Moderate.
3
Severe.
4
Life-threatening.
5
Death due to the event.

“Side effects of earlier treatment resolved to grade 1 or less” means they have settled to mild or gone.

Hemoglobin (Hb)

The protein in red blood cells that carries oxygen. A low level is anaemia, which can cause tiredness and breathlessness. Measured in g/dL or g/L (9 g/dL is 90 g/L).

Absolute neutrophil count (ANC)

The number of neutrophils, white blood cells that help fight infection, in a given amount of blood. Too few raises the risk of infection.

It is a count, not a percentage of the white cells. Limits are written in units that mean the same: ≥ 1.5 × 10⁹/L is ≥ 1,500 per mm³ (µL). Each lab has its own reference range.

Platelets

Blood cells that help blood clot. Too few raises the risk of bleeding and bruising. A usual adult range is about 150–400 × 10⁹/L (150,000–400,000 per µL); each lab has its own reference range.

Bilirubin

A yellow substance made when red blood cells are broken down, which the liver clears. A high level can mean a problem with the liver or the bile ducts.

Criteria often allow more for people with Gilbert’s syndrome, a harmless inherited condition that raises bilirubin.

ULN (upper limit of normal)

The top of the normal range for a blood test, as set by the laboratory that runs it. Each lab prints its own range next to your result.

“≤ 2.5 × ULN” means the result can be up to two and a half times that top value.

ALT and AST (liver enzymes)

Two enzymes measured in a routine blood test of the liver. Higher levels can mean the liver is under strain or damaged. SGPT and SGOT are older names for ALT and AST.

Criteria usually give a limit as a multiple of the upper limit of normal (ULN), often higher when cancer has spread to the liver.

Metastases

Cancer that has spread from where it began to other parts of the body. “Metastatic” cancer is cancer that has spread this way.

Creatinine clearance (CrCl)

How quickly the kidneys clear creatinine, a waste product, from the blood. A study may estimate it from a blood test with age, weight and sex (often by the Cockcroft–Gault formula), or measure it using blood and urine collected over a set time. Given in mL/min; higher is better.

INR, PT and aPTT (clotting tests)

Blood tests of how long blood takes to clot. The INR is the prothrombin time (PT) put on a common scale; about 1 is usual for someone not taking a blood thinner.

Criteria often make an exception for people on a blood thinner such as warfarin, whose INR is raised on purpose.

HER2

HER2 is a protein, made from the ERBB2 gene, that drives the growth of some cancers. A study may look for a level of the protein, extra copies of the gene, or a particular change in it.

In breast cancer, protein tests are read as HER2-positive, HER2-low or HER2-negative; other cancers use their own rules. Check which test result the study requires.

Adjuvant and neoadjuvant

Neoadjuvant treatment is given before the main treatment (usually surgery), often to shrink a tumour. Adjuvant treatment is given after it, to lower the chance of the cancer coming back.

Histologically or cytologically confirmed

The diagnosis was confirmed by looking at a sample under a microscope: tissue from a biopsy or surgery (histology), or cells from a fluid or needle sample (cytology).

Your pathology report is the document that shows this.

Investigational drug or device

A drug or device being studied in a clinical trial.

It may be new, or already approved and being studied for another use, dose or form. Criteria often leave out people who took part in another study of one within a recent period, commonly 30 days or five half-lives.

Immunosuppression

A weakened immune system. It can come from an illness, such as HIV or some blood cancers, or from medicines that turn the immune system down, for example after an organ transplant or for an autoimmune disease; steroids at higher doses count.

Read whether the line is about a condition or about medicines, and which medicines and doses it means.

HIV

The human immunodeficiency virus, which weakens the immune system.

Many studies now accept people whose HIV is controlled on treatment, judged by the viral load and the CD4 count. Check the limits this study sets.

NYHA class (heart failure)

The New York Heart Association’s four classes of how much heart failure limits physical activity.

I
No limits: ordinary activity causes no undue tiredness or breathlessness.
II
Slight limits: comfortable at rest, ordinary activity causes symptoms.
III
Marked limits: comfortable at rest, less than ordinary activity causes symptoms.
IV
Symptoms even at rest; any activity makes them worse.

Studies set their own limit — many outside heart failure leave out class III–IV, while heart failure studies may ask for a particular class. Check the class this study names.

Hypersensitivity

An allergy, or another reaction of the immune system, to a substance. “Hypersensitivity to the study drug” means a known allergic reaction to it — not every side effect a medicine can have.

Cancer (malignancy)

Malignancy means cancer. Criteria about another or earlier malignancy ask whether you have had a different cancer, usually within a set number of years.

Some are commonly allowed, such as treated skin cancers other than melanoma and early cancers removed completely — check the exceptions this study lists.

Autoimmune disease

A condition in which the immune system attacks the body’s own tissues, such as rheumatoid arthritis, lupus, psoriasis, type 1 diabetes or inflammatory bowel disease.

Immunotherapy studies often leave out active autoimmune disease, and some name exceptions, such as thyroid disease on replacement hormone. Check the exceptions this study lists.

Corticosteroids (steroids)

Anti-inflammatory medicines such as prednisone, prednisolone and dexamethasone — not the anabolic steroids used for muscle.

Studies differ in what they allow: check which steroid medicines, routes (tablets, injections, creams, inhalers, eye drops) and doses this study accepts.

Live vaccines

Vaccines made with a weakened form of the germ, such as measles–mumps–rubella (MMR), chickenpox and yellow fever. They can be risky when the immune system is weakened. Flu injections are not live; the nasal flu spray is.

PD-1, PD-L1 and checkpoint inhibitors

PD-1, PD-L1 and CTLA-4 are proteins that act as brakes on the immune system. Checkpoint inhibitors, such as pembrolizumab or nivolumab, block them so the immune system can attack a cancer.

PD-L1 can also be measured in a tumour sample. Some scores count stained tumour cells only (TPS); others also count certain immune cells (CPS). The study names the score and the minimum it uses.

Leptomeningeal disease

Cancer that has spread to the leptomeninges, the thin layers covering the brain and spinal cord, and the fluid between them. It is not the same as brain metastases.

Criteria often treat it separately, and many studies leave it out even where treated brain metastases are allowed.

Brain metastases

Cancer deposits in the brain from a cancer that started elsewhere in the body (CNS metastases include the spinal cord).

Studies differ: some leave out any brain metastases, some accept ones treated and stable for some weeks. Check what this study allows.

05

Study design

Phase
Phase 1 / Phase 2
Primary purpose
Treatment
Allocation
Non-randomized
Intervention model
Sequential assignment
Masking
None (open label)
Enrollment
138 participants (estimated)

Study arms

  • Experimental
    Cohort 1(cyclophosphamide, vaccine) ** NO LONGER ENROLLING **

    NO LONGER ENROLLING Patients receive cyclophosphamide IV on day -3. Patients then receive personalized neoantigen vaccine with GM-CSF SC on days 1, 4, 8, and 15 of cycle 1 and on day 1 of cycle 2 in the absence of disease progression or unacceptable toxicity. Patients may undergo tumor biopsy throughout the study. Additionally, patients undergo blood sample collection as well as CT or MRI throughout the study.

    Drug: Cyclophosphamide · Biological: Neoantigen Peptide Vaccine · Biological: Sargramostim · Procedure: Biospecimen Collection · Procedure: Biopsy · Procedure: Computed Tomography · Procedure: Magnetic Resonance Imaging

  • Experimental
    Cohort 2 (cyclophophamide, vaccine, pembrolizumab) ** NO LONGER ENROLLING **

    NO LONGER ENROLLING Patients receive cyclophosphamide IV on day -3. Patients then receive personalized neoantigen vaccine with GM-CSF SC on days 1, 4, 8, and 15 of cycle 1 and then on day 1 of cycles 2, 5, and 8. Patients also receive pembrolizumab IV over 30 minutes on day 1 of each cycle. Cycles repeat every 21 days for up to 2 years in the absence of disease progression or unacceptable toxicity. Patients may undergo tumor biopsy throughout the study. Additionally, patients undergo blood sample collection as well as CT or MRI throughout the study.

    Drug: Cyclophosphamide · Biological: Neoantigen Peptide Vaccine · Biological: Pembrolizumab · Biological: Sargramostim · Procedure: Biospecimen Collection · Procedure: Biopsy · Procedure: Computed Tomography · Procedure: Magnetic Resonance Imaging

  • Experimental
    Cohort 3 (cyclophosphamide, vaccine, pembrolizumab) **NOT enrolling additional participants.**

    NOT enrolling additional participants. Enrollment status will be updated as more information becomes available. Patients with early-stage TNBC receive cyclophosphamide IV on day -3. Patients then receive personalized neoantigen vaccine with GM-CSF SC on days 1, 4, 8, and 15 of cycle 1 and then on day 1 of cycles 2, 5, and 8. Patients also receive pembrolizumab IV over 30 minutes on day 1 of each cycle or as clinically indicated. Cycles repeat every 21 days in the absence of disease progression or unacceptable toxicity. Patients may undergo tumor biopsy throughout the study. Additionally, patients undergo blood sample collection as well as CT or MRI throughout the study.

    Drug: Cyclophosphamide · Biological: Neoantigen Peptide Vaccine · Biological: Pembrolizumab · Biological: Sargramostim · Procedure: Biospecimen Collection · Procedure: Biopsy · Procedure: Computed Tomography · Procedure: Magnetic Resonance Imaging

  • Experimental
    Cohort 4 (cyclophosphamide, vaccine, pembrolizumab) **NOT enrolling additional participants.**

    NOT enrolling additional participants. Enrollment status will be updated as more information becomes available. Patients with early-stage NSCLC receive cyclophosphamide IV on day -3. Patients then receive personalized neoantigen vaccine with GM-CSF SC on days 1, 4, 8, and 15 of cycle 1 and then on day 1 of cycles 2, 5, and 8. Patients also receive pembrolizumab IV over 30 minutes on day 1 of each cycle or as clinically indicated. Cycles repeat every 21 days in the absence of disease progression or unacceptable toxicity. Patients may undergo tumor biopsy throughout the study. Additionally, patients undergo blood sample collection as well as CT or MRI throughout the study.

    Drug: Cyclophosphamide · Biological: Neoantigen Peptide Vaccine · Biological: Pembrolizumab · Biological: Sargramostim · Procedure: Biospecimen Collection · Procedure: Biopsy · Procedure: Computed Tomography · Procedure: Magnetic Resonance Imaging

  • Experimental
    Pilot Cohort 5 (cyclophosphamide, vaccine, pembrolizumab)

    Patients with ILC receive cyclophosphamide IV on day -3. Patients then receive personalized neoantigen vaccine with GM-CSF SC on days 1, 4, 8, and 15 of cycle 1 and then on day 1 of cycles 2, 5, and 8. Patients also receive pembroblizumab IV on day of each cycle or as clinically indicated. Cycles repeat every 21 days in the absence of disease progression or unacceptable toxicity. All patients may undergo tumor biopsy throughout the study. Additionally, patients undergo blood sample collection as well as CT or MRI throughout the study.

    Drug: Cyclophosphamide · Biological: Neoantigen Peptide Vaccine · Biological: Pembrolizumab · Biological: Sargramostim · Procedure: Biospecimen Collection · Procedure: Biopsy · Procedure: Computed Tomography · Procedure: Magnetic Resonance Imaging

Interventions

  • Given IV

    Also known as: (-)-Cyclophosphamide, 2H-1,3,2-Oxazaphosphorine, 2-[bis(2-chloroethyl)amino]tetrahydro-, 2-oxide, monohydrate, Carloxan, Ciclofosfamida, Ciclofosfamide, Cicloxal, Clafen, Claphene, CP monohydrate, CTX, CYCLO-cell, Cycloblastin, Cycloblastine, Cyclophospham, Cyclophosphamid monohydrate, Cyclophosphamide Monohydrate, Cyclophosphamidum, Cyclophosphan, Cyclophosphane, Cyclophosphanum, Cyclostin, Cyclostine, Cytophosphan, Cytophosphane, Cytoxan, Fosfaseron, Genoxal, Genuxal, Ledoxina, Mitoxan, Neosar, Revimmune, Syklofosfamid, WR- 138719

  • Receive personalized neoantigen vaccine SC

  • BiologicalPembrolizumab

    Given IV

    Also known as: Keytruda, Lambrolizumab, MK-3475, SCH 900475, GME 751, Immunoglobulin G4, Pembrolizumab Biosimilar GME751, Pembrolizumab Biosimilar QL2107, QL2107, Pembrolizumab Biosimilar BCD-201

  • BiologicalSargramostim

    Given SC

    Also known as: 23-L-Leucinecolony-Stimulating Factor 2, DRG-0012, Leukine, Prokine, rhu GM-CFS, Sagramostim, Sargramostatin

  • ProcedureBiospecimen Collection

    Undergo blood sample collection

    Also known as: Biological Sample Collection, Biospecimen Collected, Blood Sample Collection, Specimen Collection

  • ProcedureBiopsy

    Undergo tissue biopsy

    Also known as: BIOPSY_TYPE, Bx

  • ProcedureComputed Tomography

    Undergo CT

    Also known as: CAT, CAT Scan, Computed Axial Tomography (CAT), computerized axial tomography, Computerized axial tomography (procedure), Computerized Tomography, Computerized Tomography (CT) scan, CT, CTScan, CT scan, tomography

  • ProcedureMagnetic Resonance Imaging

    Undergo MRI

    Also known as: Magnetic Resonance Imaging (MRI), Magnetic resonance imaging (procedure), Magnetic Resonance Imaging Scan, Medical Imaging, Magnetic Resonance / Nuclear Magnetic Resonance, MR, MRI, MRI Scan, MRIs, NMR Imaging, NMRI, nuclear magnetic resonance imaging, sMRI, Structural MRI

06

What researchers measure

Primary outcomes

  1. Maximally tolerated dose (MTD) (Phase I, Cohort 1, Cohort 2, and Pilot Cohort 5)

    MTD is defined as the dose level below the lowest dose that induces dose-limiting toxicity (DLT) in at least one-third of patients (at least 2 of a maximum of 6 new patients). A total of 6 patients treated at the MTD will be sufficient to identify common toxicities at the MTD. For instance, those toxicities with an incidence of at least 25% will be observed with a probability of at least 82% (1-(1-0.25).

    Time frame: Up to 2 years

  2. Dose Limiting Toxicity (DLT) (Phase I, Cohort 1, Cohort 2, and Pilot Cohort 5)

    DLT are defined to be adverse event (AE) occurring from day -3 through day 35 that is possibly, probably, or definitely related to neoantigen peptide vaccine with/without pembrolizumab and fulfills any of the following criteria using the National Cancer Institute's Cancer Therapy Evaluation Program Common Terminology Criteria for Adverse Events (CTCAE), version (v) 5.0

    Time frame: Up to 2 years

  3. Incidence of adverse events (Phase I, Cohort 1, Cohort 2, and Pilot Cohort 5)

    The number and severity (grade) of all treatment related adverse events (AEs) will be tabulated and summarized. Non-hematologic AEs will be evaluated via the ordinal CTCAE v5.0 standard AE grading. Hematologic toxicity measures of thrombocytopenia, neutropenia, and leukopenia will be assessed using continuous variables as the outcome measures (primarily nadir) as well as categorization via CTCAE v5.0 standard AE grading. Both all grade and grade 3 and above AEs will be described and summarized in a similar fashion. Overall AE incidences as well as AE profiles by dose level and patient will be explored and summarized. Frequency distributions, graphical techniques and other descriptive measures will form the basis of these analyses.

    Time frame: Up to 2 years from first vaccine administration

  4. Event free survival (EFS) (Phase II Cohort 3)

    EFS is defined as the length of time after primary treatment for a cancer ends until occurrence of complications or events that the treatment was intended to prevent or delay.

    Time frame: Up to 2 years

  5. Disease-free survival (DFS) (Phase II Cohort 4)

    DFS is defined as the length of time after primary treatment for a cancer ends until any signs or symptoms of that cancer recur.

    Time frame: Up to 2 years

Secondary outcomes

  1. Immunogenicity response rate (Phase I, Cohort 1, Cohort 2, and Pilot Cohort 5)

    Will be defined as number of patients who have ≥ 20% of neoantigens formulated into vaccine with at least 3-folds of value increase at any timepoint within 24 weeks, divided by total number of evaluable patients. Evaluable patients are defined as patients who are properly registered and received at least one dose of vaccine.

    Time frame: Within 24 weeks

  2. Incidence of adverse events (Phase II)

    Will be assessed using CTCAE v5.0. Defined as the proportion of patients experienced at least one grade 3, grade 4, or grade 5 of each type of AE during the protocol defined treatment. The binary endpoints will be estimated, in each cohort (or by dose level. Dose intensity and number of cycles will be summarized by mean, standard deviation, median, Q1, Q3, and range, in each cohort. The maximum grade for each type of adverse events that are possibly, probably, or definitely related to study treatments will be recorded for each patient. The frequency tables will be reviewed to determine the patterns.

    Time frame: Up to 2 years

  3. Immunogenicity response rate (Phase II)

    Will be defined as number of patients who have ≥ 20% of neoantigens formulated into vaccine with at least 3-folds of value increase at any timepoint within 24 weeks, divided by total number of evaluable patients. Evaluable patients are defined as patients who are properly registered and received at least one dose of vaccine.

    Time frame: Within 24 weeks

Other outcomes

  1. Objective response rate (Phase I and Pilot Cohort 5)

    Will be defined as number of patients who achieve complete response or partial response per Response Evaluation Criteria in Solid Tumors criteria version 1.1, confirmed based on at least two consecutive evaluations with 6 weeks apart or at the next re-staging computed tomography scan determined by treating physician, divided by total number of evaluable patients.

    Time frame: Within 12 weeks

  2. Persistence Immunogenicity response rate (Phase I and Phase II)

    Will be defined as number of patients who have as at least 3-folds of value increase of any neoantigen from baseline at 12 months among neoantigens that had been detected with at least 3-folds of value increase within 24 weeks from baseline, divided by total number of evaluable patients.

    Time frame: Within 24 weeks from baseline

  3. Pre-existing Immunity (Phase I and Phase II)

    Will be defined as number of patients with mean antigen-specific T cell frequency is statistically higher (P\<0.05) from no antigen wells at baseline, divided by total number of evaluable patients.

    Time frame: Within 24 weeks from baseline

07

Study locations

1 of 1 sites recruiting
08

References and documents

09

Timeline

Tracking since Sep 25, 2026
ElapsedEstimatedEstimated, not yet reachedSimilar studies: half by the dot; the band is the middle halfHalf of similar studies reached it by the dot; the band is the middle half, from a quarter to three quarters

Started Mar 2022 (actual). Primary completion is estimated for Mar 2028, 72 months after the start.

Of 81 phase 1/2 interventional studies under Uterine Cervical Neoplasms, half reached primary completion within 62 months of starting (the median), counting those still running; a quarter within 36 and three quarters within 75. This study's planned 72 months is above that.

How these figures are worked out, and which studies are left out of them.

Registered
Feb 25, 2022
First posted
Mar 8, 2022
StartActual
Mar 31, 2022
Primary completionEst.
Mar 31, 2028
CompletionEst.
Mar 31, 2028
Last update
Aug 20, 2026
What these dates mean
Start.
When the first participant enrolled; while estimated, when the study expects to open to recruitment.
Primary completion.
When the last participant was examined or treated to collect data for the study's main question, its primary outcome. A study that stopped early gives the date its data collection stopped.
Completion.
When the last participant's last visit took place, for every outcome, secondary ones and side effects included: the end of the study. Often later than primary completion, sometimes the same day.
Actual and Est.
Actual means the registry says the date has happened. Est. (estimated) is a date the sponsor plans or expects. It can still move, and the sponsor is expected to change it to actual once it has passed.
No changes since tracking began. The registry record was last updated on Aug 20, 2026, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
10

Registry details

Key details

Study ID
NCT05269381
Lead sponsor
Mayo Clinic
Responsible party
Sponsor
First posted
Mar 8, 2022
Start date
Mar 31, 2022
Primary completion
Mar 31, 2028 (estimated)
Completion
Mar 31, 2028 (estimated)
Last update
Aug 20, 2026

Study contacts

Clinical Trials Referral Office
Contact
mayocliniccancerstudies@mayo.edu
855-776-0015
Yanyan Lou, MD, PhD
principal investigator · Mayo Clinic

Oversight

Data monitoring committee
Yes
FDA-regulated drug
Yes
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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Studies of the drug tested here: Neoantigen Peptide Vaccine

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