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Active, not recruitingNCT03779854Updated Sep 25, 2026

Naive T Cell Depletion for Preventing Chronic Graft-versus-Host Disease in Children and Young Adults With Blood Cancers Undergoing Donor Stem Cell Transplant

A Phase 2 interventional study of Total-Body Irradiation and Thiotepa in Acute Biphenotypic Leukemia, Acute Leukemia and Acute Leukemia of Ambiguous Lineage, sponsored by Fred Hutchinson Cancer Center. Active, not recruiting at 9 sites in United States. Open to participants aged 6 Months to 26 Years, including healthy volunteers. Per ClinicalTrials.gov, last updated 2026-09-25.

Sponsored by Fred Hutchinson Cancer Center · Phase 2, Interventional, and Treatment

Updated Sep 25, 2026Primary completion movedStudy completion movedGo to Updates ↓
Phase
Phase 2
Study type
Interventional
Enrollment
45
Allocation
Randomized
Ages
6 Months to 26 Years
Sex
All
01

Study summary

This phase II trial studies how well naive T-cell depletion works in preventing chronic graft-versus-host disease in children and young adults with blood cancers undergoing donor stem cell transplant. Sometimes the transplanted white blood cells from a donor attack the body's normal tissues (called graft versus host disease). Removing a particular type of T cell (naive T cells) from the donor cells before the transplant may stop this from happening.

Read the detailed description

Patients are randomized to 1 of 2 arms. All patients receive 1 of 3 conditioning regimens.

CONDITIONING REGIMEN A: Patients undergo total body irradiation (TBI) twice daily (BID) on days -10 to -7, then receive thiotepa intravenously (IV) over 3 hours once daily (QD) on days -6 and -5, and fludarabine IV over 30 minutes once daily on days -6 to -2.

CONDITIONING REGIMEN B: Patients undergo TBI BID on days -8 to -5, then receive fludarabine IV over 30 minutes QD on days -4 to -2, and cyclophosphamide IV over 1 hour QD on days -3 and -2.

CONDITIONING REGIMEN C: Patients receive fludarabine IV over 30 minutes QD on days -6 to -2, busulfan IV over 180 minutes QD on days -5 to -2, and undergo total body irradiation BID on day -1.

ARM I: Patients receive naive T-cell depleted PBSCs on day 0.

ARM II: Patients receive unmanipulated T cell-replete BM on day 0.

GVHD PROPHYLAXIS: All patients receive tacrolimus IV on days -1 to +50 followed by a taper in the absence of grade II-IV aGVHD. Patients also receive methotrexate IV on days +1, +3, +6, and +11.

Additionally, all patients undergo echocardiography (ECHO) and cerebrospinal fluid (CSF) collection at baseline as well as blood sample collection and bone marrow aspiration with or without biopsy throughout the trial.

After completion of study treatment, patients are followed up at days 28, 56, 90, 180, 270, and 365 and then at months 15, 18, 21, and 24.

02

Conditions studied

  • Acute Biphenotypic Leukemia
  • Acute Leukemia
  • Acute Leukemia of Ambiguous Lineage
  • Acute Lymphoblastic Leukemia
  • Acute Undifferentiated Leukemia
  • Allogeneic Hematopoietic Stem Cell Transplantation Recipient
  • Blastic Plasmacytoid Dendritic Cell Neoplasm
  • Blasts Under 25 Percent of Bone Marrow Nucleated Cells
  • Blasts Under 5 Percent of Bone Marrow Nucleated Cells
  • Mixed Phenotype Acute Leukemia
  • Myelodysplastic Syndrome With Excess Blasts-1
  • Myelodysplastic Syndrome/Acute Myeloid Leukemia
  • Burkitt Leukemia
  • Chronic Monocytic Leukemia
  • Lymphoblastic Lymphoma
  • Mast Cell Leukemia
  • Myeloproliferative Neoplasm
03

In context

Leukemia, Biphenotypic, Acute

110 studies on the registry are indexed under Leukemia, Biphenotypic, Acute; 51 are open to participants now.

This study's enrollment of 45 is close to the median of 50 across 98 interventional studies indexed under Leukemia, Biphenotypic, Acute.

Browse Leukemia, Biphenotypic, Acute studies →

Lead sponsor

Fred Hutchinson Cancer Center is the lead sponsor of 537 studies on the registry; 79 are open to participants now.

Of its 57 completed or terminated interventional studies of FDA-regulated products, 45 (79%) have results posted.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
6 Months to 26 Years
Sexes eligible
All
Accepts healthy volunteers
Yes

Inclusion criteria

  • The patient must have one of the following diagnoses and be considered to be an appropriate candidate for allogeneic HCT by the study site principal investigator (PI):

    • Acute lymphoblastic leukemia (ALL) with \< 5% marrow blasts.
    • Acute myeloid leukemia (AML) with \< 25% marrow blasts.
    • Other acute leukemia (OAL) or related neoplasm (including but not limited to acute biphenotypic leukemia [ABL], ambiguous lineage [ALAL], mixed phenotype acute leukemia [MPAL], blastic plasmacytoid dendritic cell neoplasm [BPDCN], acute undifferentiated leukemia [AUL], lymphoblastic lymphoma, Burkitt leukemia/lymphoma, mast cell leukemia, chronic monocytic leukemia [CML] with blast crisis or other chronic myeloproliferative neoplasm) with \< 5% marrow blasts.
    • Myelodysplastic syndrome (MDS) with excess blasts (EB-1 and EB-2) and has received cytotoxic induction chemotherapy (excluding small molecule inhibitors and de-methylating agents)
  • Age 6 months to 26 years at the time informed consent is obtained using the Informed Consent to Participate in a Research Study form
  • Matched related donor (MRD) or matched unrelated donor (MUD) (defined as 8/8 match for human leukocyte antigen [HLA]-A, -B, -C, -DRB1).
  • Planned product type for infusion is PBSC or BM (i.e. not cord blood):

    • For feasibility phase, planned product type for infusion must be PBSC.
    • For RCT, planned product type must be PBSC or BM.
  • Karnofsky or Lansky score >= 60%.
  • Left ventricular ejection fraction (LVEF) at rest >= 40%.
  • Diffusing capacity of the lungs for carbon monoxide (DLCO) (corrected for hemoglobin) >= 60% predicted by pulmonary function tests (PFTs)

    * Patients who are unable to perform PFTs (age \< 6 years or considered developmentally incapable of PFTs): oxygen saturation (by oximetry) must be >= 92% on room air.

  • Total bilirubin =\< 2 x upper limit of normal (ULN) (unless value[s] > 2 x ULN are disease- or medication-related).

    * If value(s) are > 2 x ULN and not disease- or medication related, patient must be evaluated by a gastrointestinal (GI) physician. If GI physician considers protocol treatment to be contraindicated for the patient, the patient will not be eligible for the study.

  • Alanine aminotransferase (ALT), aspartate aminotransferase (AST) =\< 2 x ULN (unless value[s] > 2 x ULN are disease- or medication-related).

    * If value(s) are > 2 x ULN and not disease- or medication related, patient must be evaluated by a gastrointestinal GI physician. If GI physician considers protocol treatment to be contraindicated for the patient, the patient will not be eligible for the study.

  • Serum creatinine (SCr) within normal range for age. If SCr is outside normal range for age, creatinine clearance (CrCl) > 40 mL/min/1.73m\^2 must be obtained (measured by 24-hour [hr] urine specimen or nuclear glomerular filtration rate [GFR]).

    • Age (Years): Maximum SCr (mg/dL)
    • =\< 5: 0.8
    • 6-10: 1
    • 11-15: 1.2
    • > 15: 1.5
  • Recipient informed consent/assent/legal guardian permission documentation must be obtained.
  • DONOR: May be related (MRD) or unrelated (MUD) to the subject.
  • DONOR: Must be matched to the subject at 8/8 HLA alleles (HLA-A, -B, -C, and -DRB1)
  • DONOR: Be >=14 years of age.
  • DONOR: Must be available to donate in the United States of America (USA) (i.e. excludes international donors).
  • DONOR: Must agree to donate BM or PBSC (i.e. agree to donate whichever product type is requested) (applicable only to the RCT phase of this study).
  • DONOR: MUDs:

    • Must give informed consent according to applicable National Marrow Donor Program (NMDP) donor regulatory requirements
    • Must meet eligibility criteria as defined by the NMDP or be ineligible with statement of urgent medical need (exception 21 CFR 1271.65(b)(iii))

      • Tests must be performed using Food and Drug Administration (FDA) licensed, cleared, and approved test kits in a Clinical Laboratory Improvement Amendments (CLIA)-certified laboratory
  • DONOR: MRDs:

    • Must be negative for human immunodeficiency virus (HIV)-1, HIV-2, human T-lymphotropic virus (HTLV)-1, HTLV-2, hepatitis B, hepatitis C (serological and/or nucleic acid testing [NAT] and/or other approved testing)
    • Must meet institutional donor eligibility criteria, or be ineligible with statement that the donor is a first or second degree relative (exception 21 CRF 1271.65(b)(i)).

      • Tests must be performed using FDA licensed, cleared, and approved test kits in a CLIA-certified laboratory.

Exclusion criteria

Exclusion Criteria:

  • Active central nervous system (CNS) disease. A patient may have a history of CNS disease; however, any CNS disease must be cleared by the end of the pre-conditioning evaluation. If CNS disease is identified on the first cerebrospinal fluid (CSF) evaluation within 30 days of the start of the preparative regimen, a repeat CSF evaluation must be performed and show no evidence of disease in order for the patient to be eligible for the protocol.
  • Patients on other experimental protocols for the prevention of GVHD.
  • Patient body weight:

    • Matched related donor (MRD): > 100 kg are ineligible
    • Matched unrelated donor (MUD): > 75 kg must be discussed with the protocol principal investigator (PI) prior to enrollment.
  • HIV-positive.
  • Uncontrolled infections must be evaluated by an infectious disease physician and considered suitable to undergo HCT by the study site PI, infectious disease physician and protocol PI. Upper respiratory tract infection (URI) does not constitute an uncontrolled infection in this context.
  • Life expectancy \< 3 months from disease other than acute leukemia or myelodysplastic syndrome (MDS).
  • Significant medical condition that would make recipient unsuitable for HCT.
  • Prior allogeneic or autologous HCT.
  • Females who are pregnant or breastfeeding.
  • Patients of child bearing age who are presumed to be fertile and are unwilling to use an effective birth control method or refrain from sexual intercourse during study treatment and for 12 months following HCT.
  • Known hypersensitivity to tacrolimus, fludarabine, or methotrexate (MTX).
05

Study design

Phase
Phase 2
Primary purpose
Treatment
Allocation
Randomized
Intervention model
Parallel assignment
Masking
None (open label)
Enrollment
45 participants (actual)

Study arms

  • Experimental
    Arm I (chemotherapy, naive T-cell depleted PBSC)

    CONDITIONING REGIMEN A: Patients undergo TBI BID on days -10 to -7, then receive thiotepa IV over 3 hours QD on days -6 and -5, and fludarabine IV over 30 minutes once daily on days -6 to -2. CONDITIONING REGIMEN B: Patients undergo TBI BID on days -8 to -5, then receive fludarabine IV over 30 minutes QD on days -4 to -2, and cyclophosphamide IV over 1 hour QD on days -3 and -2. CONDITIONING REGIMEN C: Patients receive fludarabine IV over 30 minutes QD on days -6 to -2, busulfan IV over 180 minutes QD on days -5 to -2, and undergo total body irradiation BID on day -1. TRANSPLANT: Patients receive naive T-cell depleted PBSCs on day 0. GVHD PROPHYLAXIS: All patients receive tacrolimus IV beginning on day -1 and methotrexate IV on days 1, 3, 6, and 11. Additionally, patients undergo ECHO and CSF collection at baseline as well as blood sample collection and bone marrow aspiration with or without biopsy throughout the trial.

    Radiation: Total-Body Irradiation · Drug: Thiotepa · Drug: Fludarabine · Drug: Cyclophosphamide · Drug: Busulfan · Drug: Tacrolimus · Drug: Methotrexate · Procedure: Naive T Cell-Depleted Hematopoietic Stem Cell Transplantation · Procedure: Echocardiography · Procedure: Biospecimen Collection · Procedure: Bone Marrow Aspiration · Procedure: Bone Marrow Biopsy

  • Active comparator
    Arm II (chemotherapy, unmanipulated T cell replete BM)

    CONDITIONING REGIMEN A: Patients undergo TBI BID on days -10 to -7, then receive thiotepa IV over 3 hours QD on days -6 and -5, and fludarabine IV over 30 minutes once daily on days -6 to -2. CONDITIONING REGIMEN B: Patients undergo TBI BID on days -8 to -5, then receive fludarabine IV over 30 minutes QD on days -4 to -2, and cyclophosphamide IV over 1 hour QD on days -3 and -2. CONDITIONING REGIMEN C: Patients receive fludarabine IV over 30 minutes QD on days -6 to -2, busulfan IV over 180 minutes QD on days -5 to -2, and undergo total body irradiation BID on day -1. TRANSPLANT: Patients receive unmanipulated T cell-replete BM on day 0. GVHD PROPHYLAXIS: All patients receive tacrolimus IV beginning on day -1 and methotrexate IV on days 1, 3, 6, and 11. Additionally, patients undergo ECHO and CSF collection at baseline as well as blood sample collection and bone marrow aspiration with or without biopsy throughout the trial.

    Radiation: Total-Body Irradiation · Drug: Thiotepa · Drug: Fludarabine · Drug: Cyclophosphamide · Drug: Busulfan · Procedure: Allogeneic Bone Marrow Transplantation · Drug: Tacrolimus · Drug: Methotrexate · Procedure: Echocardiography · Procedure: Biospecimen Collection · Procedure: Bone Marrow Aspiration · Procedure: Bone Marrow Biopsy

Interventions

  • RadiationTotal-Body Irradiation

    Undergo TBI

    Also known as: Total Body Irradiation, Whole-Body Irradiation, SCT_TBI, TBI, Whole Body Irradiation

  • DrugThiotepa

    Given IV

    Also known as: 1,1',1"-phosphinothioylidynetrisaziridine, Oncotiotepa, STEPA, Tepadina, Tespamin, Tespamine, Thio-Tepa, Thiofosfamide, Thiofozil, Thiophosphamide, Thiophosphoramide, triethylenethiophosphoramide

  • DrugFludarabine

    Given IV

    Also known as: 2-Fluoro-9-beta-arabinofuranosyladenine, 2-Fluorovidarabine, Fluradosa

  • DrugCyclophosphamide

    Given IV

    Also known as: Carloxan, Ciclofosfamida, Ciclofosfamide, Cicloxal, Clafen, Claphene, Cycloblastin, Cytophosphane

  • DrugBusulfan

    Given IV

    Also known as: Bussulfam, Busulfanum, Busulfex, Busulphan, Misulban, Misulfan, Mitosan, Myeleukon

  • ProcedureAllogeneic Bone Marrow Transplantation

    Receive unmanipulated T cell replete BM

    Also known as: Allo BMT, Allogeneic Blood and Marrow Transplantation, Allogeneic BMT

  • DrugTacrolimus

    Given IV

    Also known as: Fujimycin, Hecoria, Prograf, Protopic

  • DrugMethotrexate

    Given IV

    Also known as: Abitrexate, Alpha-Methopterin, Amethopterin, Brimexate, Emtexate, Emthexat, Emthexate, Farmitrexat, Medsatrexate, Methoblastin, Rheumatrex

  • ProcedureNaive T Cell-Depleted Hematopoietic Stem Cell Transplantation

    Receive naive T-cell depleted PBSCs

  • ProcedureEchocardiography

    Undergo ECHO

    Also known as: EC, ECHO

  • ProcedureBiospecimen Collection

    Undergo CSF and blood sample collection

  • ProcedureBone Marrow Aspiration

    Undergo bone marrow aspiration

  • ProcedureBone Marrow Biopsy

    Undergo bone marrow biopsy

06

What researchers measure

Primary outcomes

  1. Feasibility achievement

    Success defined as achievement of cell selection goals for two consecutive Naive T cells (TN)-depleted peripheral blood stem cells (PBSC) hematopoietic cell transplantation (HCTs) at each study site (Feasibility)

    Time frame: Up to 2 years

  2. Engraftment of neutrophils by day 28 (Feasibility)

    Success defined as achievement neutrophil engraftment (absolute neutrophil count \[ANC\] \>= 500/mm\^3) on first day of three consecutive laboratory values obtained on different days.

    Time frame: At day 28

  3. Current-graft versus host disease (GVHD)-free, relapse-free survival (Randomized Controlled Trial [RCT])

    Defined as alive, no relapse after HCT, no current GVHD requiring prednisone, no graft rejection or graft failure. The proportion of subjects meeting the primary endpoint will be described in each arm with 90% confidence intervals (CI) and compared between arms using the chi-square test. A two-sided 10% significance level will be used for this comparison.

    Time frame: At 1 year

Secondary outcomes

  1. Chronic GVHD (cGVHD) meeting National Institutes of Health (NIH) criteria and requiring prednisone (RCT)

    Cumulative incidence curve will be computed for each arm along with a 90% CI at 1 year and 2 years post-HCT. Death and/or relapse prior to occurrence of cGVHD will be considered as competing risks. The cumulative incidence curves will be compared between arms using Gray's test. The maximum severity of cGVHD will also be described in each arm and compared using the chi-squared test.

    Time frame: At 1 and 2 years

  2. Proportion of subjects alive and off prednisone (or equivalent systemic corticosteroid) for treatment of GVHD (RCT)

    Proportions of subjects alive without requiring use of prednisone (or equivalent systemic corticosteroid) for GVHD will be estimated with 90% CI for both arms at time points over 24 months, and compared using the chi-squared test.

    Time frame: At 3, 6, 9, 12, 15, 18, 21 and 24 months post HCT

07

Study locations

9 sites
  • Children's Hospital of Los Angeles
    Los Angeles, California 90027, United States
  • Children's Healthcare of Atlanta
    Atlanta, Georgia 30329, United States
  • University of Iowa/Holden Comprehensive Cancer Center
    Iowa City, Iowa 52242, United States
  • Dana Farber / Boston Children's Hospital
    Boston, Massachusetts 02115, United States
  • UH Rainbow Babies and Children's Hospital (University Hospitals Cleveland Medical Center)
    Cleveland, Ohio 44106, United States
  • Cleveland Clinic Foundation
    Cleveland, Ohio 44195, United States
  • Oregon Health and Science University
    Portland, Oregon 97239, United States
  • Children's Hospital of Pittsburgh of UPMC
    Pittsburgh, Pennsylvania 15224, United States
  • Fred Hutch/University of Washington Cancer Consortium
    Seattle, Washington 98109, United States
08

References and documents

Publications

  • Bleakley M. Naive T-cell depletion in stem cell transplantation. Blood Adv. 2020 Oct 13;4(19):4980. doi: 10.1182/bloodadvances.2020001888. PubMed 33049057 ↗

Individual participant data

Plan to share: No

09

Updates

1 registry update since Sep 25, 2026
Primary completion
Dec 31, 2028→Aug 31, 2027
Sep 25, 2026
Study completion
Dec 31, 2028→Aug 31, 2027
Sep 25, 2026
Show all 1 update
  1. Sep 25, 2026
    Primary completion Dec 31, 2028→Aug 31, 2027
    Study completion Dec 31, 2028→Aug 31, 2027
    + 1 other change: verification date

From the registry record's own update history. This site started tracking changes on Sep 25, 2026; for anything earlier, see the record history on ClinicalTrials.gov ↗

10

Registry details

Key details

Study ID
NCT03779854
Lead sponsor
Fred Hutchinson Cancer Center
Collaborators
National Cancer Institute (NCI)
Responsible party
Sponsor
First posted
Dec 19, 2018
Start date
Aug 29, 2019
Primary completion
Aug 31, 2027 (estimated)
Completion
Aug 31, 2027 (estimated)
Last update
Sep 25, 2026

Study contacts

Marie Bleakley
principal investigator · Fred Hutch/University of Washington Cancer Consortium

Oversight

Data monitoring committee
Yes
FDA-regulated drug
Yes
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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