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RecruitingNCT07255430Updated Mar 19, 2026

Airway Microbiome of Patients With Protracted Bacterial Bronchitis

An observational study in Protracted Bacterial Bronchitis, sponsored by University Hospital, Antwerp. Recruiting at 1 site in Belgium. Open to participants aged Up to 5 Years. Per ClinicalTrials.gov, last updated 2026-03-19.

Sponsored by University Hospital, Antwerp · Observational

From the registry’s dates

  • Started Jan 2026; still recruiting 10 months later.
Study type
Observational
Model
Cohort
Time perspective
Prospective
Enrollment
160
Ages
Up to 5 Years
Sex
All
01

Study summary

This project aims to assess the relationship between the microbiome and virome composition, the immune responses, and the respiratory health of children with protracted bacterial bronchitis (PBB). In addition, we aim to evaluate how the standard treatment with azithromycin interacts with the components of the microbiome, virome and immune biomarkers.

Read the detailed description

Protracted Bacterial Bronchitis (PBB) is an often underestimated disease, characterized by a persistent cough for more than four weeks, without other significant underlying symptoms. While generally treatable, it can lead to complications such as recurrent infections and airway damage (bronchiectasis). The reasons why some children develop PBB or subsequent complications while others do not remain unclear. Recent research suggests that an impaired immune response and microbiota dysbiosis may play a key role. This study aims to analyze the microbial and viral composition of the airways in children with PBB, its relationship with inflammation, and the effects of azithromycin. Oropharyngeal swabs will be collected from up to 160 children \<5 years old diagnosed with PBB at UZA in a longitudinal setup during one year. At each routine consultation (five in total) and during an exacerbation episode, three oropharyngeal swabs will be collected from each child. The three swabs will be used to: (1) determine the microbiome composition using next-generation sequencing, (2) identify the virome composition using multiplex qPCR or similar approaches, and (3) quantify immune biomarkers (RNA and protein-level) and culture microbial isolates. These findings will help to better understand the role of the airway microbiome in young children with PBB and identify microorganisms that may have a pathogenic or protective role. Ultimately, this knowledge may contribute to the development of new and effective diagnostics and treatments for PBB from an early age.

02

Conditions studied

  • Protracted Bacterial Bronchitis

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Keywords

  • cough
  • Protracted Bacterial Bronchitis
  • microbiome
03

In context

Cough

427 studies on the registry are indexed under Cough; 67 are open to participants now.

This study's planned enrollment of 160 is above the median of 100 across 95 observational studies indexed under Cough.

Browse Cough studies →

Lead sponsor

University Hospital, Antwerp is the lead sponsor of 242 studies on the registry; 66 are open to participants now.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
Up to 5 Years
Sexes eligible
All
Accepts healthy volunteers
No
Sampling method
Probability sample

Study population

Children under five years old diagnosed with PBB.

Go through the criteria one by one — yes, no or not sure — and take the list to your doctor or the study team. Kept in this browser only.

Inclusion criteria

  • Children with PBB diagnosis according to case definition
  • Consent form signed by parents or legal guardians

Exclusion criteria

Exclusion Criteria:

  • Comorbidities (, asthma, , diabetes)
  • Have had serious illnesses (meningitis, pneumonia, bacteremia, empyema, etc) in the previous three months, identified only at the time of enrollment.
  • Have chronic respiratory conditions at the time of enrollment (non-PBB bronchiectasis not caused by PBB, CF, allergy, etc.).
  • Having received mechanical ventilation.
  • Having been hospitalized or used antibiotics in the previous three months at the time of enrollment.
Terms in these criteria, in plain language(2)

Underlined terms in the criteria open these too. Explained by clinicaltrials.gg, not part of the registry record. The study team decides who can take part.

HIV

The human immunodeficiency virus, which weakens the immune system.

Many studies now accept people whose HIV is controlled on treatment, judged by the viral load and the CD4 count. Check the limits this study sets.

COPD

Chronic obstructive pulmonary disease: long-term lung disease that makes it hard to breathe out, including emphysema and chronic bronchitis.

05

Study design

Observational model
Cohort
Time perspective
Prospective
Enrollment
160 participants (estimated)
Target follow-up
12 Months
Patient registry
Yes
Biospecimen retention
Samples with dna

Groups and cohorts

  • Participants with Protracted bacterial bronchitis diagnostic

    Children under five years old who attend pediatric outpatient visits or well-child visits at University Hospital Antwerp (UZA) and are diagnosed with Protracted bacterial bronchitis.

06

What researchers measure

Primary outcomes

  1. Analysis of respiratory microbiome composition

    Description: Analysis of microbiome communities in airway samples will be performed using amplicon or shotgun sequencing to determine relative microbial abundances (in percentages) as the unit of measure, coupled with the use of bioinformatic tools for community structure analysis.

    Time frame: Baseline, 3 months, 6 months, 9 months, 12 months and during exacerbations

  2. Prevalence of respiratory viruses

    Description: Detection of respiratory viruses from airway samples using RT-qPCR. Unit of Measure: percentage of positive samples (in percentages).

    Time frame: Baseline, 3 months, 6 months, 9 months, 12 months and during exacerbations

Secondary outcomes

  1. Immune biomarkers profiling in airway samples

    Immunological profiling will be performed in airway samples by determining (1) cytokine concentrations based on protein-level analysis such as ELISA (pg/mL) and/or (2) differential gene expression based on RNA analysis (log fold-change or similar metric).

    Time frame: Baseline, 3 months, 6 months, 9 months, 12 months and during exacerbations

  2. Correlates of respiratory microbiome

    Description: Microbial profiles will be associated with demographic, epidemiological and clinical data collected through standardized questionnaires and clinical assessments to determine relevant correlates. Unit of Measure: Statistical association measure (e.g., correlation coefficients or similar).

    Time frame: Baseline, 3 months, 6 months, 9 months, 12 months and during exacerbations

  3. Correlates of Protracted Bacterial Bronchitis

    PBB events will be associated with demographic, epidemiological and clinical data collected through standardized questionnaires and clinical assessments to determine relevant correlates. Unit of Measure: Effect estimates (odds/prevalence/hazard ratios or similar).

    Time frame: Baseline, 3 months, 6 months, 9 months, 12 months and during exacerbations

07

Study locations

1 of 1 sites recruiting
08

References and documents

Individual participant data

Plan to share: Yes — The metadata of participants in the study will be made available in a restricted access repository. For samples and data sharing, the researchers will work with the legal department to establish Material/Data Transfer Agreements. Sequencing data are available at the European Nucleotide Archive. Physical samples are their origin will be stored at the decentral hub of the Antwerp biobank.

Time frame: After the completion of the study (intended in 2029) and before publication, sequences and related metadata will be deposited into the ENA database and made available indefinitely.

Access criteria: After data deposition in ENA, the data will be publicly accessible to anyone using the ENA instructions https://www.ebi.ac.uk/ena/browser/downloading-data

No publications or documents are linked to this record.

09

Timeline

Tracking since Sep 25, 2026
ElapsedEstimatedEstimated, not yet reachedSimilar studies: half by the dot; the band is the middle halfHalf of similar studies reached it by the dot; the band is the middle half, from a quarter to three quarters

Started Jan 2026 (actual). Primary completion is estimated for Jan 2028, 24 months after the start.

Of 33 observational studies under Cough, half reached primary completion within 20 months of starting (the median), counting those still running; a quarter within 14. This study's planned 24 months is above that.

How these figures are worked out, and which studies are left out of them.

Registered
Oct 1, 2025
First posted
Dec 1, 2025
StartActual
Jan 7, 2026
Primary completionEst.
Jan 2028
CompletionEst.
Jan 2029
Last update
Mar 19, 2026
What these dates mean
Start.
When the first participant enrolled; while estimated, when the study expects to open to recruitment.
Primary completion.
When the last participant was examined or treated to collect data for the study's main question, its primary outcome. A study that stopped early gives the date its data collection stopped.
Completion.
When the last participant's last visit took place, for every outcome, secondary ones and side effects included: the end of the study. Often later than primary completion, sometimes the same day.
Actual and Est.
Actual means the registry says the date has happened. Est. (estimated) is a date the sponsor plans or expects. It can still move, and the sponsor is expected to change it to actual once it has passed.
No changes since tracking began. The registry record was last updated on Mar 19, 2026, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
10

Registry details

Key details

Study ID
NCT07255430
Responsible party
Sponsor
First posted
Dec 1, 2025
Start date
Jan 7, 2026
Primary completion
Jan 2028 (estimated)
Completion
Jan 2029 (estimated)
Last update
Mar 19, 2026

Study contacts

Kim Van Hoorenbeeck, Prof. dr.
Contact
kim.vanhoorenbeeck@uza.be
+3238213000
Irina Spacova, Prof. dr. ir.
Contact
irina.spacova@uantwerpen.be
+3232653289
Kim Van Hoorenbeeck, Prof. dr.
principal investigator · University Hospital, Antwerp
Irina Spacova, Prof. dr. ir.
principal investigator · Universiteit Antwerpen

Oversight

Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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