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RecruitingNCT06778083SPEARUpdated Mar 27, 2025

STI Prophylaxis and Emergence of Antimicrobial Resistance

An observational study in Sexually Transmitted Infection (STI) Prevention, Antibiotic Prophylaxis and Antibiotic Resistance, Bacterial, sponsored by University College, London. Recruiting at 1 site in United Kingdom. Open to male participants aged 18 Years and older, including healthy volunteers. Per ClinicalTrials.gov, last updated 2025-03-27.

Sponsored by University College, London · Observational

From the registry’s dates

  • Started Feb 2025; still recruiting 1 year 7 months later.
Study type
Observational
Model
Cohort
Time perspective
Prospective
Enrollment
108
Ages
18 Years and older
Sex
Male
01

Study summary

The goal of this observational study is to understand the risk of antibiotic resistance and changes in the human microbiome (bacteria that live inside and on us), if people use antibiotics to prevent sexually transmitted infections (STI prophylaxis, doxycycline post-exposure prophylaxis, or 'doxyPEP'). The study will assess how easy and acceptable it is to find antibiotic resistance and microbiome changes in the throats and guts of men-who-have-sex-with-men (MSM) who use STI prophylaxis.

The study will recruit 108 MSM who are using and not using STI prophylaxis. Participants will visit the clinic every 6 months. At each visit, they will provide a throat swab and stool sample, and complete a questionnaire. DNA of the bacteria from the samples will be analysed to identify the bacteria and look for antibiotic resistance.

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Conditions studied

  • Sexually Transmitted Infection (STI) Prevention
  • Antibiotic Prophylaxis
  • Antibiotic Resistance, Bacterial
  • Microbiome
  • Doxycycline

Keywords

  • DoxyPEP
  • STI Prophylaxis
  • Doxycycline
  • STI Prevention
  • Antimicrobial Resistance
  • Antibiotic Resistance
  • Microbiome
  • Men-who-have-sex-with-men
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In context

Sexually Transmitted Diseases

424 studies on the registry are indexed under Sexually Transmitted Diseases; 71 are open to participants now.

This study's planned enrollment of 108 is below the median of 513 across 74 observational studies indexed under Sexually Transmitted Diseases.

Browse Sexually Transmitted Diseases studies →

Lead sponsor

University College, London is the lead sponsor of 632 studies on the registry; 145 are open to participants now.

Of its 6 completed or terminated interventional studies of FDA-regulated products, 2 (33%) have results posted.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
18 Years and older
Sexes eligible
Male
Accepts healthy volunteers
Yes
Sampling method
Non-probability sample

Study population

Men-who-have-sex-with men aged ≥ 18 years living in the United Kingdom. Target of 108 participants, with minimum 40 participants living with HIV.

Inclusion criteria

  • Aged ≥ 18 years.
  • Identifies as a man (cis or trans).
  • Has sex with men.
  • Able to provide informed consent.

Exclusion criteria

Exclusion Criteria:

  • Use of an antibiotic other than doxycycline in the 3 months prior to enrolment
  • Currently being treated for an STI with doxycycline
  • Use of doxycycline within the prior 3 months for an indication other than STI treatment or STI prevention.
05

Study design

Observational model
Cohort
Time perspective
Prospective
Enrollment
108 participants (estimated)
Patient registry
No
Biospecimen retention
Samples with dna

Groups and cohorts

  • DoxyPEP users

    Previous use of doxycycline post-exposure prophylaxis within 3 months of baseline visit.

  • Doxycycline treatment

    Previous use of doxycycline for STI treatment within 3 months of baseline visit. Once enrolled all participants may use doxycycline post-exposure prophylaxis.

  • No antibiotics

    No antibiotics within previous 3 months of baseline visit. Once enrolled all participants may use doxycycline post-exposure prophylaxis.

06

What researchers measure

Primary outcomes

  1. Detection of antimicrobial resistance genes of interest and characterisation of microbiome

    The successful detection of antimicrobial resistance genes of interest (tetracycline and other antibiotic classes) and identification of bacterial species (microbiome) and in the oropharynx and gastrointestinal tract.

    Time frame: From enrolment to 12 months

Secondary outcomes

  1. Detection of differences in prevalence of antimicrobial resistance genes of interest between people using and not using antibiotic STI prophylaxis.

    Time frame: From enrolment to 12 months

  2. Detection of differences in microbiome between people using and not using antibiotic STI prophylaxis.

    Time frame: From enrolment to 12 months

  3. Change over time in prevalence of antimicrobial resistance genes of interest between people using and not using antibiotic STI prophylaxis.

    Time frame: From enrolment to 12 months

  4. Change over time in microbiome between people using and not using antibiotic STI prophylaxis.

    Time frame: From enrolment to 12 months

07

Study locations

1 of 1 sites recruiting
  • Central and North West London NHS Foundation Trust
    London, United Kingdom
    Recruiting
08

References and documents

Publications

  • Kohli M, Reid D, Pulford CV, Howarth A, Brown J, Mohammed H, Hughes G, Mercer CH, Saunders J. Choice of antibiotics for prophylaxis of bacterial STIs among individuals currently self-sourcing. Sex Transm Infect. 2022 Mar;98(2):158. doi: 10.1136/sextrans-2021-055310. Epub 2021 Dec 6. No abstract available. PubMed 34873029 ↗
  • Kohli M, Medland N, Fifer H, Saunders J. BASHH updated position statement on doxycycline as prophylaxis for sexually transmitted infections. Sex Transm Infect. 2022 May;98(3):235-236. doi: 10.1136/sextrans-2022-055425. No abstract available. PubMed 35414633 ↗
  • Chu VT, Glascock A, Donnell D, Grabow C, Brown CE, Ward R, Love C, Kalantar KL, Cohen SE, Cannon C, Woodworth MH, Kelley CF, Celum C, Luetkemeyer AF, Langelier CR. Impact of doxycycline post-exposure prophylaxis for sexually transmitted infections on the gut microbiome and antimicrobial resistome. Nat Med. 2025 Jan;31(1):207-217. doi: 10.1038/s41591-024-03274-2. Epub 2024 Oct 3. PubMed 39363100 ↗
  • Molina JM, Charreau I, Chidiac C, Pialoux G, Cua E, Delaugerre C, Capitant C, Rojas-Castro D, Fonsart J, Bercot B, Bebear C, Cotte L, Robineau O, Raffi F, Charbonneau P, Aslan A, Chas J, Niedbalski L, Spire B, Sagaon-Teyssier L, Carette D, Mestre SL, Dore V, Meyer L; ANRS IPERGAY Study Group. Post-exposure prophylaxis with doxycycline to prevent sexually transmitted infections in men who have sex with men: an open-label randomised substudy of the ANRS IPERGAY trial. Lancet Infect Dis. 2018 Mar;18(3):308-317. doi: 10.1016/S1473-3099(17)30725-9. Epub 2017 Dec 8. PubMed 29229440 ↗
  • Molina JM, Bercot B, Assoumou L, Rubenstein E, Algarte-Genin M, Pialoux G, Katlama C, Surgers L, Bebear C, Dupin N, Ouattara M, Slama L, Pavie J, Duvivier C, Loze B, Goldwirt L, Gibowski S, Ollivier M, Ghosn J, Costagliola D; ANRS 174 DOXYVAC Study Group. Doxycycline prophylaxis and meningococcal group B vaccine to prevent bacterial sexually transmitted infections in France (ANRS 174 DOXYVAC): a multicentre, open-label, randomised trial with a 2 x 2 factorial design. Lancet Infect Dis. 2024 Oct;24(10):1093-1104. doi: 10.1016/S1473-3099(24)00236-6. Epub 2024 May 23. PubMed 38797183 ↗
  • Luetkemeyer AF, Donnell D, Dombrowski JC, Cohen S, Grabow C, Brown CE, Malinski C, Perkins R, Nasser M, Lopez C, Vittinghoff E, Buchbinder SP, Scott H, Charlebois ED, Havlir DV, Soge OO, Celum C; DoxyPEP Study Team. Postexposure Doxycycline to Prevent Bacterial Sexually Transmitted Infections. N Engl J Med. 2023 Apr 6;388(14):1296-1306. doi: 10.1056/NEJMoa2211934. PubMed 37018493 ↗

Study documents

  • Study protocol · Dec 16, 2024

Documents are hosted by the registry — open the source record to download them.

Individual participant data

Plan to share: No

09

Updates

Tracking since Sep 25, 2026
No changes since tracking began. The registry record was last updated on Mar 27, 2025, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
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Registry details

Key details

Study ID
NCT06778083
Lead sponsor
University College, London
Collaborators
University of Oxford
Responsible party
Sponsor
First posted
Jan 16, 2025
Start date
Feb 10, 2025
Primary completion
Apr 30, 2027 (estimated)
Completion
Apr 30, 2027 (estimated)
Last update
Mar 27, 2025

Study contacts

Manik Kohli, MBChB MSc
Contact
m.kohli@ucl.ac.uk
+4420276794466

Oversight

Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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