A Phase 1/2 interventional study of RAD001 and Placebo in PTEN Gene Mutation and PTEN Hamartoma Tumor Syndrome, sponsored by Boston Children's Hospital. Completed at 3 sites in United States. Open to participants aged 5 Years to 45 Years. Per ClinicalTrials.gov, last updated 2025-02-17.
Sponsored by Boston Children's Hospital · Phase 1/2, Interventional, and Treatment
Phosphatase and TENsin homolog (PTEN) gene germline mutations are associated with a spectrum of clinical manifestations characterized by neurocognitive deficits, intellectual disability, autism symptomatology, skin lesions, macrocephaly, hamartomatous overgrowth of tissues, and an increased risk of cancers. Investigators are conducting research to evaluate the potential safety and efficacy of RAD001 (everolimus) in this patient population, and the potential neurocognitive benefits from treatment with RAD001 or placebo for a six month period. The investigators hope this trial will lead to a better understanding of PTEN and to new forms of treatment that may benefit children and adults with PTEN in the future.
This is a signal seeking Phase I/II 6-month, randomized, double-blind placebo-controlled trial of everolimus in individuals, ages 5 to 45 years with a PTEN mutation, with safety and neurocognition as the primary endpoints.
Participant's or a legal guardian will need to sign an informed consent prior to enrollment in the study. To determine eligibility participants will undergo a series of screening tests and safety measures. If determined to be eligible for the blinded phase of the study, participants will be randomly assigned to take either the study drug or a placebo (pill with no medicine).
The blinded phase of the study involves about eight visits, five of which will occur at the study site, and three of which will be conducted over the phone. These visits will take place over a six month period. Study visits will vary in length. Baseline, three month and six month visits may last up to 8 hours, if optional measures are done, while all other visits will be less than 2 hours. The study visits include blood draws, general health exams, and neuropsychological assessments. The study will also include optional eye-tracking, EEG and auditory evoked potential (AEP) measures, and the collection of microbiome/mycobiome and biomarker blood sample. There is no fee to participate in this study. The study drug will be provided at no charge during the study.
After the 6 month treatment phase, individuals who were randomly assigned to take placebo will be offered inclusion in a 6 month open label phase where the study drug will be provided at no charge. The open label phase assessments will be similar to those done in the blinded phase, but patients/families will only need to return to the study site three times during this phase.
Participants will receive a developmental assessments report after completing the study. After all study data has been analyzed, patients and families will also be informed of the overall results. Treatment on this study may or may not improve an individual's learning skills (neurocognition) or behavior. We hope that future patients and families will benefit from what is learned by this study.
Specific Aims /Objectives Primary objective
-To evaluate the safety of everolimus compared with placebo in patients with PTEN mutations focusing on NCI CTCAE Grade 3 and 4 adverse events, serious adverse events, and Grade 3 and 4 laboratory toxicities.
Secondary objectives
-To evaluate the efficacy of everolimus on neurocognition and behavior in inividuals with PTEN mutations compared to placebo as measured by standardized, direct and indirect neurocognitive tools and behavioral measures.
21 studies on the registry are indexed under Hamartoma Syndrome, Multiple; 9 are open to participants now.
Browse Hamartoma Syndrome, Multiple studies →Boston Children's Hospital is the lead sponsor of 607 studies on the registry; 148 are open to participants now.
Of its 33 completed or terminated interventional studies of FDA-regulated products, 19 (58%) have results posted.
Counted across the registry records on this site, refreshed daily.
Double-Blind Inclusion Criteria
Adequate bone marrow function as shown by:
Adequate liver function as shown by:
Double-Blind Exclusion Criteria
Patients who have a history of another primary malignancy, with the exceptions of:
Women of child-bearing potential (WOCBP), defined as all women physiologically capable of becoming pregnant, must use highly effective methods of contraception during the study and 8 weeks after. Highly effective contraception methods include:
a. A combination of any two of the following: i. Use of oral, injected or implanted hormonal non-estrogen containing methods of contraception or; ii. Placement of an intrauterine device (IUD) or intrauterine system (IUS); iii. Barrier methods of contraception: condom or occlusive cap (diaphragm or cervical/vault caps) with spermicidal foam/gel/film/cream/ vaginal suppository; b. Total abstinence or; c. Male/female sterilization. Women are considered post-menopausal and not of child-bearing potential if they have had 12 months of natural (spontaneous) amenorrhea with an appropriate clinical profile (e.g. age appropriate, history of vasomotor symptoms) or have had surgical bilateral oophorectomy (with or without hysterectomy) or tubal ligation at least six weeks prior to randomization. In the case of oophorectomy alone, only when the reproductive status of the woman has been confirmed by follow up hormone level assessment is she considered not of child-bearing potential.
Open-Label Inclusion Criteria
RAD001 is formulated as tablets of 5.0 mg or 2.5mg strength, blister-packed under aluminum foil in units of 10 tablets and dosed on a regular basis.
Drug: RAD001
Matching placebo will be provided as a matching tablet and will also be blister packed under aluminum foil in units of 10.
Drug: Placebo
RAD001 is formulated as tablets of 5.0 mg strength, blister-packed under aluminum foil in units of 10 tablets and dosed on a regular basis. RAD001 tablets should be opened only at the time of administration as drug is both hygroscopic and light-sensitive. Patients will be instructed to take 4.5 mg/m2 of RAD001 orally with a glass of water at regular intervals at the same time (delete: each day) in the morning after a light, nonfat breakfast.
Also known as: Everolimus, Afinitor
Matching placebo will be provided as a matching tablet and will also be blister packed under aluminum foil in units of 10. Matching placebo tablets should be opened only at the time of administration as drug is both hygroscopic and light-sensitive. Patients will be instructed to take 4.5 mg/m2 of the matching placebo orally with a glass of water at regular intervals at the same time (delete: each day) in the morning after a light, nonfat breakfast.
Incidence of Treatment-Emergent Adverse Events [Safety and Tolerability], Dropout
The primary endpoint will be safety as measured by study drop-out rate due to side effects, comparing everolimus vs. placebo. We will also determine the frequency of adverse events by type and severity. This section displays participant dropout rate and for what reason.
Time frame: Through study completion, an average of 6 months
Incidence of Treatment-Emergent Adverse Events [Safety and Tolerability], Adverse Events (AEs) Overview (% of Participants)
The primary endpoint will be safety as measured by study drop-out rate due to side effects, comparing everolimus vs. placebo. We will also determine the frequency of adverse events by type and severity. this section displays the number of participants who experienced an AE and the description of such AEs, pertaining to: 1. Seriousness 2. Grade, 3. Relation to treatment 4. Recovery from AE 5. Category
Time frame: Through study completion, an average of 6 months
Change at 6 Months in Composite Score
Composite score was based on the following: Stanford-Binet Intelligence Scales, 5th Ed (SB-5) non-verbal and verbal working memory standard score; for the SB-5, the minimum score is 40 and the maximum score is 160, where the higher score represents a better outcome. Conners' Continuous Performance Test, 3rd Ed (CPT-3) hit reaction time standard score (reverse coded; standard score generated from T-score); for the CPT-3, the min score is 0 and the max score is 90, where the lower the T-score, the better the outcome. Purdue Pegboard Test (PPT) both hands standard score (generated from T-score); for the PPT, the min score is 20 and the max score is 190, where the higher the T-score, the better the outcome. For the composite score, the higher the score, the better the outcome. The composite score is on the SS metric (M=100, SD=15, min=20, max=180).
Time frame: 6 months
Change in Processing Speed at 6 Months, Conner's Continuous Performance Test (CPT)-3
Processing speed will be evaluated using mean reaction time on the Conner's Continuous Performance Test (CPT)-3. This outcome evaluates the change from baseline to 6 months.
Time frame: 6 months
Change in Fine Motor Skills at 6 Months, Purdue Pegboard
Fine motor skills will be evaluated using the Purdue Pegboard sub-tests average of both hands. This outcome evaluates the change from baseline to 6 months.
Time frame: 6 months
Change in Global Cognitive Ability at 6 Months, Stanford-Binet Intelligence Scales, Fifth Edition (SB-5) or Mullen Scales of Early Learning
Change in global cognitive ability will be measured by Stanford-Binet 5 or Mullen; Full scale, verbal and nonverbal ability (IQ). This outcome evaluates the change from baseline to 6 months.
Time frame: 6 months
Change in Motor Functioning at 6 Months, Purdue Pegboard and Developmental Coordination Disorder Questionnaire (DCDQ)
Motor functioning will be measured by the Purdue Pegboard (Pegs): Dominant and non-dominant hand combined standard scores and Developmental Coordination Disorder Questionnaire (DCDQ): Total score. This outcome evaluates the change from baseline to 6 months.
Time frame: 6 months
Change in Memory, Executive Functioning, Autism Symptoms, Adaptive Behaviors, and Other Behaviors at 6 Months
1. Change in memory measured by Wide Range Assessment of Memory and Learning (WRAML-2) verbal learning core subtest, delayed recall, and recognition scaled scores over 6 months. 2. Change in executive functioning measured by Behavior Rating Inventory of Executive Function (BRIEF-2) global executive composite standard score over 6 months. 3. Change in autism symptoms measured by Social Responsiveness Scale (SRS-2) total standard score and Repetitive Behaviors Scale (RBS-R) total subscale score over 6 months. 4. Change in adaptive behaviors measured by Vineland Adaptive Behavior Scales (VABS-III) adaptive behavior composite standard score over 6 months. 5. Change in other behaviors measured by Child Behavior Checklist (CBCL) total problems standard score and Short Sensory Profile (SSP) total score over 6 months.
Time frame: 6 months
| Milestone | RAD001 | Placebo |
|---|---|---|
| Started | 24 | 22 |
| Completed | 21 | 20 |
| Not completed | 3 | 2 |
| Withdrew: Withdrawal by subject | 2 | 1 |
| Withdrew: Physician decision | 0 | 1 |
| Withdrew: Investigator decision at baseline given safety concerns related to drug administration compliance | 1 | 0 |
The primary endpoint will be safety as measured by study drop-out rate due to side effects, comparing everolimus vs. placebo. We will also determine the frequency of adverse events by type and severity. This section displays participant dropout rate and for what reason.
| Participants | RAD001 | Placebo | Total |
|---|---|---|---|
| Dropout (Total) | 3 | 2 | 5 |
| Dropout due to participant/parent request | 2 | 1 | 3 |
| Dropout due to investigator request | 0 | 1 | 1 |
| Dropout due to other requests | 1 | 0 | 1 |
The primary endpoint will be safety as measured by study drop-out rate due to side effects, comparing everolimus vs. placebo. We will also determine the frequency of adverse events by type and severity. this section displays the number of participants who experienced an AE and the description of such AEs, pertaining to: 1. Seriousness 2. Grade, 3. Relation to treatment 4. Recovery from AE 5. Category
| percentage of participants | RAD001 | Placebo | Total |
|---|---|---|---|
| Any AE (%) | 87.5 | 59.1 | 73.9 |
| Non-serious AEs (%) | 87.5 | 59.1 | 73.9 |
| Serious AEs (%) | 12.5 | 0 | 6.5 |
| Grade 1 (%) | 75 | 45.5 | 60.9 |
| Grade 2 (%) | 50 | 18.2 | 34.8 |
| Grade 3 (%) | 16.7 | 0 | 8.7 |
| Grade 4 (%) | 0 | 0 | 0 |
| Grade 5 (%) | 0 | 0 | 0 |
| Definitely not related to treatment (%) | 20.8 | 27.3 | 23.9 |
| Probably not related to treatment (%) | 37.5 | 18.2 | 28.3 |
| Possibly or probably related to treatment (%) | 70.8 | 31.8 | 52.2 |
| Definitely related to treatment (%) | 12.5 | 0 | 6.5 |
| Patients not recovered/not resolved from AEs (%) | 0 | 4.5 | 2.2 |
| Patients recovered/resolved with sequelae form AEs (%) | 4.2 | 0 | 2.2 |
| Patients recovered/resolved without sequelae fro AEs (%) | 83.3 | 59.1 | 71.7 |
| Patients recovering/resolving from AEs (%) | 8.3 | 3 | 4.3 |
Composite score was based on the following: Stanford-Binet Intelligence Scales, 5th Ed (SB-5) non-verbal and verbal working memory standard score; for the SB-5, the minimum score is 40 and the maximum score is 160, where the higher score represents a better outcome. Conners' Continuous Performance Test, 3rd Ed (CPT-3) hit reaction time standard score (reverse coded; standard score generated from T-score); for the CPT-3, the min score is 0 and the max score is 90, where the lower the T-score, the better the outcome. Purdue Pegboard Test (PPT) both hands standard score (generated from T-score); for the PPT, the min score is 20 and the max score is 190, where the higher the T-score, the better the outcome. For the composite score, the higher the score, the better the outcome. The composite score is on the SS metric (M=100, SD=15, min=20, max=180).
| score on a scale | RAD001 - Baseline | Placebo - Baseline | RAD001 - 6 Months | Placebo - 6 Months |
|---|---|---|---|---|
| Change at 6 Months in Composite Score | 80.34 ± 15.23 | 75.14 ± 18.30 | 81.60 ± 17.17 | 78.47 ± 21.96 |
Processing speed will be evaluated using mean reaction time on the Conner's Continuous Performance Test (CPT)-3. This outcome evaluates the change from baseline to 6 months.
| score on a scale | RAD001 - Baseline | Placebo - Baseline | RAD001 - 6 Months | Placebo - 6 Months |
|---|---|---|---|---|
| Change in Processing Speed at 6 Months, Conner's Continuous Performance Test (CPT)-3 | 87.78 ± 20 | 86.30 ± 16.16 | 89.26 ± 22.35 | 90.15 ± 15.46 |
Fine motor skills will be evaluated using the Purdue Pegboard sub-tests average of both hands. This outcome evaluates the change from baseline to 6 months.
| score on a scale | RAD001 - Baseline | Placebo - Baseline | RAD001 - 6 Months | Placebo - 6 Months |
|---|---|---|---|---|
| Change in Fine Motor Skills at 6 Months, Purdue Pegboard | 62.83 ± 20.52 | 55.92 ± 23.56 | 67.12 ± 20.08 | 61.49 ± 33.37 |
Change in global cognitive ability will be measured by Stanford-Binet 5 or Mullen; Full scale, verbal and nonverbal ability (IQ). This outcome evaluates the change from baseline to 6 months.
| score on a scale | RAD001 - Baseline | Placebo - Baseline | RAD001 - 6 Months | Placebo - 6 Months |
|---|---|---|---|---|
| Full Scale (FSIQ) | 77.83 ± 19.85 | 75.19 ± 22.90 | 79.39 ± 17.30 | 74.79 ± 25.79 |
| Verbal (VIQ) | 78.79 ± 19.73 | 76.05 ± 23.67 | 78.46 ± 18.05 | 78.71 ± 27.07 |
| Nonverbal (NVIQ) | 78.96 ± 19.03 | 75.91 ± 22.70 | 82.31 ± 16.25 | 73.15 ± 22.87 |
Motor functioning will be measured by the Purdue Pegboard (Pegs): Dominant and non-dominant hand combined standard scores and Developmental Coordination Disorder Questionnaire (DCDQ): Total score. This outcome evaluates the change from baseline to 6 months.
| score on a scale | RAD001 - Baseline | Placebo - Baseline | RAD001 - 6 Months | Placebo - 6 Months |
|---|---|---|---|---|
| Purdue Pegboard (right hand) | 66.92 ± 22.83 | 58.64 ± 27.83 | 71.68 ± 30.18 | 61.47 ± 35.48 |
| Purdue Pegboard (left hand) | 66.46 ± 23.02 | 61.82 ± 20.91 | 75.92 ± 24.76 | 60.26 ± 29.30 |
| Purdue Pegboard (dominant hand) | 67.92 ± 21.92 | 58.63 ± 27.91 | 75.60 ± 24.78 | 59.25 ± 32.48 |
| Purdue Pegboard (non-dominant hand) | 69.37 ± 21.92 | 61.89 ± 27.91 | 75.58 ± 24.78 | 62.36 ± 32.48 |
| DCDQ Total Score | 37.51 ± 12.38 | 36.29 ± 14.20 | 40.01 ± 10.62 | 37.64 ± 16.37 |
1. Change in memory measured by Wide Range Assessment of Memory and Learning (WRAML-2) verbal learning core subtest, delayed recall, and recognition scaled scores over 6 months. 2. Change in executive functioning measured by Behavior Rating Inventory of Executive Function (BRIEF-2) global executive composite standard score over 6 months. 3. Change in autism symptoms measured by Social Responsiveness Scale (SRS-2) total standard score and Repetitive Behaviors Scale (RBS-R) total subscale score over 6 months. 4. Change in adaptive behaviors measured by Vineland Adaptive Behavior Scales (VABS-III) adaptive behavior composite standard score over 6 months. 5. Change in other behaviors measured by Child Behavior Checklist (CBCL) total problems standard score and Short Sensory Profile (SSP) total score over 6 months.
| score on a scale | RAD001 - Baseline | Placebo - Baseline | RAD001 - 6 Months | Placebo - 6 Months |
|---|---|---|---|---|
| WRAML-2 verbal learning core subtest scaled score | 6.11 ± 2.65 | 6.90 ± 3.36 | 7.47 ± 3.93 | 7.22 ± 3.76 |
| WRAML-2 verbal learning delayed recall scaled score | 6.73 ± 2.02 | 6.57 ± 3.40 | 8.13 ± 2.98 | 7.72 ± 2.99 |
| WRAML-2 verbal learning recognition scaled score | 5.94 ± 3.49 | 5.97 ± 3.14 | 6.74 ± 3.96 | 6.42 ± 4.22 |
| BRIEF-2 global executive composite standard score | 77.68 ± 19.77 | 71.18 ± 19.35 | 82.61 ± 17.43 | 74.24 ± 16.97 |
| SRS-2 total standard score | 73.12 ± 18.23 | 67.52 ± 19.60 | 78.91 ± 17.75 | 66.90 ± 19.36 |
| RBS-R total subscale score | 16.44 ± 16.83 | 23.35 ± 19.98 | 14.42 ± 5.86 | 19.96 ± 16.06 |
| VABS-III adaptive behavior composite standard score | 76.96 ± 14.44 | 74.41 ± 18.21 | 81.56 ± 10.45 | 74.71 ± 15.75 |
| CBCL total problems standard score | 85.90 ± 13.82 | 80.54 ± 18.07 | 90.10 ± 13.28 | 81.53 ± 14.80 |
| SSP total score | 137.46 ± 21.68 | 128.25 ± 26.05 | 143.08 ± 16.54 | 126.52 ± 28.09 |
Collected over 6 months. Non-serious events are listed at a 0% frequency threshold.
| Group | Deaths | Serious | Other |
|---|---|---|---|
| RAD001 | 0/24 (0%) | 3/24 (12.5%) | 21/24 (87.5%) |
| Placebo | 0/22 (0%) | 0/22 (0%) | 13/22 (59.1%) |
| Event | RAD001 | Placebo |
|---|---|---|
| Suicidal ideationPsychiatric disorders | 1/24 | 0/22 |
| Renal lesionsRenal and urinary disorders | 1/24 | 0/22 |
| Enterovirus infectionInfections and infestations | 1/24 | 0/22 |
| Event | RAD001 | Placebo |
|---|---|---|
| Mucositis OralGastrointestinal disorders | 7/24 | 1/22 |
| StomatitisSkin and subcutaneous tissue disorders | 4/24 | 0/22 |
| StomatitisGeneral disorders | 3/24 | 0/22 |
| CoughRespiratory, thoracic and mediastinal disorders | 1/24 | 2/22 |
| Runny NoseRespiratory, thoracic and mediastinal disorders | 0/24 | 2/22 |
| Middle Ear InflammationEar and labyrinth disorders | 2/24 | 0/22 |
| DiarrheaGastrointestinal disorders | 2/24 | 1/22 |
| Oral PainGastrointestinal disorders | 2/24 | 0/22 |
| Rash AcneiformSkin and subcutaneous tissue disorders | 2/24 | 0/22 |
| Rash Maculo-PapularSkin and subcutaneous tissue disorders | 2/24 | 0/22 |
| Age, Continuous(years) | RAD001 | Placebo | Total |
|---|---|---|---|
| Mean | 16.5 ± 11.3 | 14.7 ± 10.9 | 15.6 ± 11.0 |
| Sex: Female, Male(Participants) | RAD001 | Placebo | Total |
|---|---|---|---|
| Female | 11 | 7 | 18 |
| Male | 13 | 15 | 28 |
| Race (NIH/OMB)(Participants) | RAD001 | Placebo | Total |
|---|---|---|---|
| American Indian or Alaska Native | 0 | 0 | 0 |
| Asian | 0 | 0 | 0 |
| Native Hawaiian or Other Pacific Islander | 0 | 0 | 0 |
| Black or African American | 1 | 1 | 2 |
| White | 20 | 18 | 38 |
| More than one race | 1 | 1 | 2 |
| Unknown or Not Reported | 2 | 2 | 4 |
| Autism spectrum disorder (n)(participants) | RAD001 | Placebo | Total |
|---|---|---|---|
| Number | 6 | 8 | 14 |
| Autism spectrum disorder (%)(percentage of participants) | RAD001 | Placebo | Total |
|---|---|---|---|
| Number | 25 | 36.3 | 30.4 |
| Stanford-Binet Intelligence Scales, Fifth Edition (SB-5): Mean full scale IQ (FSIQ)(scores on a scale) | RAD001 | Placebo | Total |
|---|---|---|---|
| Mean | 77.8 ± 20.3 | 75.2 ± 23.5 | 76.6 ± 21.6 |
Documents are hosted by the registry — open the source record to download them.
Plan to share: Yes — Data will be shared with the National Database of Autism Research (NDAR)
Ran from Jun 2017 to primary completion in Feb 2021, 44 months.
Results were first posted in Feb 2025, 3 years 11 months after primary completion.
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Studies of the drug tested here: Everolimus
Hamartoma Syndrome, Multiple →