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RecruitingNCT07901387BioTubeUpdated Oct 28, 2026

Biomarker Analysis for Diagnosing and Treatment Monitoring in Extrapulmonary Tuberculosis Patients in Nairobi, Kenya

An observational study in Tuberculosis, Extrapulmonary Tuberculosis and Mycobacterium Tuberculosis, sponsored by Nagasaki University. Recruiting at 2 sites in Kenya. Open to participants aged 18 Years and older. Per ClinicalTrials.gov, last updated 2026-10-28.

Sponsored by Nagasaki University · Observational

From the registry’s dates

  • Started Apr 2025; still recruiting 1 year 7 months later.
Updated Oct 28, 2026Newly registeredGo to Updates ↓
Study type
Observational
Model
Cohort
Time perspective
Prospective
Enrollment
700
Ages
18 Years and older
Sex
All
01

Study summary

Tuberculosis (TB) remains a global health threat with high incidence, especially in Africa. The proportion of extrapulmonary TB (EPTB) can escalate up to 36% in areas with a high HIV prevalence. Effectively managing and controlling EPTB in high-burden regions, such as Kenya, faces obstacles owing to the limitations of the current diagnostic tools. Traditional methods, such as smear microscopy and culture, often fail to detect EPTB due to the paucibacillary nature of the disease and while newer molecular techniques such as Xpert MTB/RIF have improved the diagnosis of pulmonary TB, they demonstrate reduced sensitivity for EPTB. The inadequacy of these tools results in delayed or missed diagnosis, contributing to higher morbidity and mortality. This underscores the urgent need for more sensitive, non-invasive diagnostic methods that can be applied in resource-limited settings like Kenya. This study aims to establish a biomarker-based diagnostic method for EPTB, using biomarkers such as lipoarabinomannan (LAM), MPT64, and Ag85B to diagnose and to monitor treatment response. Additionally, to clarify the characteristics and causative microorganisms of patients suspected of having TB but yielded negative results. Techniques such as ultrasensitive enzyme-linked immunosorbent assays (ELISA) and urine concentration methods will be employed to improve detection sensitivity. It also seeks to explore the extent of non-tuberculosis mycobacteria (NTM) and fungal infections in patients in patients presenting as presumed TB.

This prospective cohort study will be conducted at Kenyatta National Hospital and Mbagathi County Hospital in Nairobi, enrolling 763 adult patients with presumed extrapulmonary TB (EPTB) and 150 control participants from November 2024 to October 2028 Clinical and demographic data, along with sputum, blood, and urine samples, will be collected at enrolment for microbiological tests and biomarker analysis. The accuracy of biomarkers will be assessed by comparing their sensitivity and specificity against established diagnostic standards. For confirmed EPTB cases (n=50), follow-up samples will be collected during TB treatment to monitor biomarker trends alongside the patient's clinical progress.

This study can enhance EPTB diagnosis by evaluating the diagnostic profile of candidate biomarkers in urine or blood samples. The findings may lead to the development of accurate, non-invasive diagnostic tools suited for resource-limited settings, improving early detection and treatment outcomes. Additionally, by clarifying the epidemiological and microbiological profiles of TB, NTM, and fungal infections, the study could guide more targeted clinical management strategies, ultimately improving patient care in high-burden regions.

02

Conditions studied

  • Tuberculosis
  • Extrapulmonary Tuberculosis
  • Mycobacterium Tuberculosis

Keywords

  • Tuberculosis
  • Diagnosis
  • Extrapulmonary tuberculosis
  • Biomarker
  • Lipoarabinomannan
  • transrenal DNA
03

In context

Tuberculosis

1,170 studies on the registry are indexed under Tuberculosis; 175 are open to participants now.

This study's planned enrollment of 700 is above the median of 253 across 317 observational studies indexed under Tuberculosis.

Browse Tuberculosis studies →

Lead sponsor

Nagasaki University is the lead sponsor of 12 studies on the registry; 4 are open to participants now.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
18 Years and older
Sexes eligible
All
Sampling method
Non-probability sample

Study population

Clinically suspected of having TB lymphadenitis, TB pleuritis, and TB meningitis.

  • Clinically suspected TB lymphadenitis: Patients with one or more palpable lymph nodes (>20 mm in diameter) located in the cervical, axillary, or inguinal regions.
  • Clinically suspected TB pleuritis: Patients presenting with respiratory symptoms (e.g., dyspnea, cough, chest pain) along with radiographic evidence of pleural effusion.
  • Clinically suspected TB meningitis: Symptoms and signs of meningitis including one or more of the following, headache, irritability, vomiting, fever, neck stiffness, convulsions, focal neurological deficits, altered consciousness or lethargy.

Go through the criteria one by one — yes, no or not sure — and take the list to your doctor or the study team. Kept in this browser only.

Inclusion criteria

  • Age 18 years and above
  • Clinically suspected active EPTB assessed by study clinicians
  • Patients with with and without HIV infection
  • Patients whose samples can be collected from affected sites (such as lymph node aspirations and , pleural aspirations, and cerebral spinal fluid aspiration according to type of EPTB suspected)
  • from patient

Exclusion criteria

Exclusion Criteria:

  • Pregnant women: Due to complexities in follow-ups and obtaining samples
  • Patient with any type of cancer who is given anti-cancer treatment within the last one year or who has undergone surgery for cancer within the last one year
  • Patient who is taking medications within the last one year: To minimize the impact medication-induced immune responses on TB disease progression and the accuracy of biomarker measurements
  • Patient who has anuria or oliguria and unable to provide 30-50ml of urine
  • Given TB treatment within one year: To avoid confounding effects from recent therapy
  • Patient who is mentally unstable
Terms in these criteria, in plain language(4)

Underlined terms in the criteria open these too. Explained by clinicaltrials.gg, not part of the registry record. The study team decides who can take part.

HIV

The human immunodeficiency virus, which weakens the immune system.

Many studies now accept people whose HIV is controlled on treatment, judged by the viral load and the CD4 count. Check the limits this study sets.

Biopsy and archival tissue

A biopsy takes a small piece of tissue to examine. “Archival tissue” is a sample already taken, for example at diagnosis, and kept by the hospital.

Whether a stored sample will do depends on when it was taken, how much there is and what the study needs. Ask whether the study accepts your stored sample or needs a new biopsy.

Informed consent

Before you join, the study team explains what taking part involves — its purpose, what happens, the risks and possible benefits — and answers your questions, so you can decide freely. Consent is usually recorded on a form (the informed consent form, ICF) signed by you or, where the law allows, by someone legally authorised to decide for you.

You can keep asking questions during the study, you are told of new information that matters, and you can choose to leave at any time.

Immunosuppression

A weakened immune system. It can come from an illness, such as HIV or some blood cancers, or from medicines that turn the immune system down, for example after an organ transplant or for an autoimmune disease; steroids at higher doses count.

Read whether the line is about a condition or about medicines, and which medicines and doses it means.

05

Study design

Observational model
Cohort
Time perspective
Prospective
Enrollment
700 participants (estimated)
Patient registry
No

Groups and cohorts

  • Extrapulmonary tuberculosis
06

What researchers measure

Primary outcomes

  1. Diagnostic accuracy of candidate biomarkers

    Time frame: From enrollment to the end of treatment at 6 months

07

Study locations

2 of 2 sites recruiting
08

Updates

1 registry update since Sep 25, 2026
Registered
First appeared on the registry. No changes since
Oct 28, 2026
Show all 1 update
  1. Oct 28, 2026
    First appeared on the registry

From the registry record's own update history. This site started tracking changes on Sep 25, 2026; for anything earlier, see the record history on ClinicalTrials.gov ↗

09

Registry details

Key details

Study ID
NCT07901387
Lead sponsor
Nagasaki University
Responsible party
Nobuo Saito (Associate Professor, Nagasaki University) — Principal investigator
First posted
Oct 28, 2026
Start date
Apr 8, 2025
Primary completion
Oct 31, 2028 (estimated)
Completion
Mar 30, 2030 (estimated)
Last update
Oct 28, 2026

Study contacts

Nobuo Saito, MD, PhD
Contact
nsaito@nagasaki-u.ac.jp
+2540773406090

Oversight

FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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