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Status unknownNCT05674032Updated Jan 6, 2023

Bacterial Metallophores in the Diagnosis of Acute Pyelonephritis

An observational study in Acute Pyelonephritis and Complicated Urinary Tract Infection, sponsored by Thomayer University Hospital. Status unknown at 1 site in Czechia. Open to participants aged 18 Years and older, including healthy volunteers. Per ClinicalTrials.gov, last updated 2023-01-06.

Sponsored by Thomayer University Hospital · Observational

The sponsor has not verified this record recently (last verified Jan 2023), so the status shown — last known as Recruiting — may be out of date.
Study type
Observational
Model
Case-control
Time perspective
Prospective
Enrollment
90
Ages
18 Years and older
Sex
All
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Study summary

The project aims to investigate bacterial metallophores as potential diagnostic markers of acute pyelonephritis and complicated urinary tract infections. These secondary metabolites are excreted by pathogenic microorganims in the course of infection for the uptake of iron and other metallic ions from the host. They are species-specific and can be detected in body fluids (including urine) by mass spectrometry. The potential contribution of this project is a culture-independent method for the diagnosis of the causative microbiological agent.

Read the detailed description

Acute pyelonephritis (AP) is a clinical syndrome characterized by fever, chills, nausea vomiting and costovertebral angle tenderness, bacteriuria and pyuria. The underlying pathophysiology is based on the presence of microbes in the renal parenchyma which may progress to sepsis. Complicated urinary tract infection (cUTI) is one accompanied by abnormalities of the urinary tract or host factors which make the eradication of the infection difficult.

The most common etiological agents include gram-negative enteric rods, i.e. E. coli, Klebsiella pneumoniae; and Enterococcus spp. Empirical antibiotic treatment should be targeted once culture and sensitivity results become available. This usually takes 24-48 hours, occasionally even 72 hours. Inadequate antibiotic treatment leads to higher mortality if the etiological agent is of a multi-drug resistant phenotype.

Metallophores are a major virulence factor of bacterial pathogens. These are chelating molecules secreted by the microbe for the uptake of iron, copper, and other metals from the host. E.g., siderophores aim at Fe3+ ions removal from the host protein molecules; the complex then adheres to specific extracellular receptors on the microbial cell and is internalized. Yersiniabactin is another metallophore which binds copper.

Proteomic analysis using mass spectrometry has been used in the detection of biomarkers for several pathological conditions: renal failure, post-transplant nephropathy, various malignancies etc. Metallophores can be detected by mass spectrometry.

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Conditions studied

  • Acute Pyelonephritis
  • Complicated Urinary Tract Infection

Keywords

  • metallophores
  • mass spectrometry
  • acute pyelonephritis
  • complicated urinary tract infection
  • siderophores
  • yersiniabactin
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In context

Pyelonephritis

79 studies on the registry are indexed under Pyelonephritis; 12 are open to participants now.

This study's planned enrollment of 90 is below the median of 153 across 15 observational studies indexed under Pyelonephritis.

Browse Pyelonephritis studies →

Lead sponsor

Thomayer University Hospital is the lead sponsor of 5 studies on the registry; 1 is open to participants now.

Counted across the registry records on this site, refreshed daily.

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Who can participate

Ages eligible
18 Years and older
Sexes eligible
All
Accepts healthy volunteers
Yes
Sampling method
Non-probability sample

Study population

Patients presenting to the department of urology and fulfilling eligibility criteria.

Go through the criteria one by one — yes, no or not sure — and take the list to your doctor or the study team. Kept in this browser only.

Inclusion criteria

  • in-patient with clinical signs and symptoms of AP/cUTI or out-patient with clinical signs and symptoms of acute uncomplicated pyelonephritis or in-patient with no clinical signs of UTI and a negative standard urine culture result

Exclusion criteria

Exclusion Criteria:

  • inability to consent
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Study design

Observational model
Case-control
Time perspective
Prospective
Enrollment
90 participants (estimated)
Patient registry
No
Biospecimen retention
Samples with dna

Groups and cohorts

  • Cases

    In-patients with AP or cUTI admitted for treatment to the hospital.

  • Control group 1

    Out-patients seeking treatment for uncomplicated acute cystitis.

  • Control group 2

    In-patients admitted to the ward without signs and symptoms of a urinary tract infection and with a negative urine culture result.

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What researchers measure

Primary outcomes

  1. Detection of metallophores

    The detection of metallophores in urine samples

    Time frame: through study completion, an average of 1 year

  2. Classification of microorganisms

    Taxonomic classification of the pathogenic microorganism using its metallophores

    Time frame: through study completion, an average of 1 year

Secondary outcomes

  1. Metallophores versus culture

    The comparison of standard urinary culture results with those obtained from mass spectrometry analysis

    Time frame: through study completion, an average of 1 year

  2. Cases versus Controls 1 versus Controls 2

    The comparison of the detection of metalophores in cases with AP/cUTI versus acute uncomplicated cystitis versus urinary tract infection-free individuals

    Time frame: 1 year after study completion

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Study locations

1 of 1 sites recruiting
  • Thomayer University Hospital
    Praha, 14059, Czechia
    Recruiting
    • Jan Hrbacek, PhD. · Contactjan.hrbacek@ftn.cz · +420261083688
    • Jiri Stejskal, M.D. · Contactjiri.stejskal@ftn.cz · +420261083688
    • Jan Hrbacek, PhD. · Principal investigator
    • Jiri Stejskal, M.D. · Sub investigator
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References and documents

Publications

  • Bonkat G, Bartoletti R, Bruyère F, Cai T, Geerlings SE, Köves B, et al. Guidelines on Urological Infections. 2020. Vallejo-Torres L, Pujol M, Shaw E, Wiegand I, Vigo JM, Stoddart M, et al. Cost of hospitalised patients due to complicated urinary tract infections: A retrospective observational study in countries with high prevalence of multidrug-resistant Gram-negative bacteria: The COMBACTE-MAGNET, RESCUING study. BMJ Open 2018;8:1-9. https://doi.org/10.1136/bmjopen-2017-020251. Hrbacek J, Cermak P, Zachoval R. Current antibiotic resistance trends of uropathogens in central europe: Survey from a tertiary hospital urology department 2011-2019. Antibiotics 2020;9:1-11. https://doi.org/10.3390/antibiotics9090630. Hyun M, Noh CI, Ryu SY, Kim HA. Changing trends in clinical characteristics and antibiotic susceptibility of Klebsiella pneumoniae bacteremia. Korean J Intern Med 2018;33:595-603. Caza M, Kronstad J. Shared and distinct mechanisms of iron acquisition by bacterial and fungal pathogens of humans. Front Cell Infect Microbiol 2013;4:1-23. https://doi.org/10.3389/fcimb.2013.00080. Prichystal J, Schug K, Lemr K, Novak J, Havlicek V. Structural analysis of natural products. Anal Chem 2016;88:10338-46. Václavková J, Ozdian T, Hajdúch M, Džubák P. Body fluids as a source of prote-omic biomarkers of various diseases. Chem List 2020;114:209-15 Skriba A, Pluhacek T, Palyzova A, Novy Z, Lemr K, Hajduch M, et al. Early and non-invasive diagnosis of aspergillosis revealed by infection kinetics monitored in a rat model. Front Microbiol 2018;9:1-7. https://doi.org/10.3389/fmicb.2018.02356. Hrbacek J, Morais D, Cermak P, Hanacek V, Zachoval R. Alpha-diversity and microbial community structure of the male urinary microbiota depend on urine sampling method. Sci Rep 2021;11. https://doi.org/10.1038/s41598-021-03292-x.

Individual participant data

Plan to share: No

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Updates

Tracking since Sep 25, 2026
No changes since tracking began. The registry record was last updated on Jan 6, 2023, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
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Registry details

Key details

Study ID
NCT05674032
Lead sponsor
Thomayer University Hospital
Collaborators
Czech Academy of Sciences
Responsible party
Jan Hrbacek, M.D. (Principal Investigator, Thomayer University Hospital) — Principal investigator
First posted
Jan 6, 2023
Start date
Jun 24, 2020
Primary completion
Dec 2024 (estimated)
Completion
Dec 2024 (estimated)
Last update
Jan 6, 2023

Study contacts

Jan Hrbacek, PhD.
Contact
honzahrbacek@gmail.com
+420261083688
Roman Zachoval, Prof.
Contact
roman.zachoval@ftn.cz
+420261083688
Jan Hrbacek, PhD.
study director · Thomayer University Hospital

Oversight

Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

Not currently enrolling

This study is status unknown, as verified in Jan 2023. You cannot join it, but the record below documents what was studied.

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