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RecruitingNCT04046900MOTIFUpdated Sep 11, 2026

Vaginal Microbiota Transplant

A Phase 1/2 interventional study of Vaginal microbiome transplant and Oral Metronidazole in Recurrent Bacterial Vaginosis, sponsored by Douglas Kwon. Recruiting at 1 site in United States. Open to female participants aged 18 Years to 50 Years. Per ClinicalTrials.gov, last updated 2026-09-11.

Sponsored by Douglas Kwon · Phase 1/2, Interventional, and Prevention

Phase
Phase 1/2
Study type
Interventional
Enrollment
62
Allocation
Randomized
Ages
18 Years to 50 Years
Sex
Female
01

Study summary

This is a randomized trial of vaginal microbiome transplant vs. saline placebo to restore a Lactobacillus dominant vaginal microbial community in women with recurrent bacterial vaginosis.

Read the detailed description

The investigators propose a randomized, double-blind, placebo-controlled trial to evaluate the safety of vaginal microbiota transplant (VMT) in women with recurrent bacterial vaginosis (BV), and to assess the ability of antibiotic treatment plus vaginal microbiota transplant to establish a Lactobacillus-dominant vaginal community as compared to antibiotic treatment alone. The underlying hypothesis is that the VMT will lead to less inflammation and higher prevalence of vaginal Lactobacillus compared to antibiotics alone. The transplant material will be vaginal fluid collected from healthy donors using a disposable menstrual cup. Donors undergo extensive testing for possible infections to ensure the safety of the donated material.

Study Visits and Procedures: In addition to the pre-screening eligibility phone call and screening visit, there will be two treatment study visits and six post-VMT follow up visits at weeks 3, 5, 7, 11, 15, and 27. The baseline visit will occur within 45 days of the screening visit.

Phone Screen: A brief phone discussion to explain approach and alternatives (see details below in "Technical Methods"). A set of short screening questions will be asked to identify women with clear exclusion criteria for participation.

Visit 1, Screening Visit: At the screening visit, after written informed consent is obtained, the information from the pre-screening questionnaire will be reviewed with the subject and updated as necessary. Blood and vaginal specimens will be collected. The VMT process will be explained in detail and subjects will have the opportunity to inspect an example applicator if interested. Subjects will be counseled not to have vaginal intercourse or insert anything into their vagina from the 72 hours prior to the first transplant dose until 72 hours after the second transplant dose.

  • Review eligibility and understand/see applicator
  • Obtain informed consent
  • Height, weight measurements
  • Subjects will be given information about how to perform vaginal swab collections (see vaginal swab collection document)
  • Physical exam
  • Pelvic exam
  • Screening labs: Complete blood cell count w/ differential, comprehensive metabolic panel, Pap/HPV (human papillomavirus) testing, gonorrhea, chlamydia, trichomonas testing. HIV, Hepatitis B\&C, Herpes.
  • Urine pregnancy test
  • Behavior and sexual assessment

Visit 2: Baseline, Week 1 (occurs immediately prior to menses)

  • Self-Administered Vaginal Swab and soft cup collection
  • Blood draw
  • Pelvic Exam: cervical swabs, cytobrush
  • Symptom and Sexual Behavior Assessment
  • Assignment into study groups using block randomization
  • Subjects will be given 7-day course of: Metronidazole 500mg PO every 12 hours

Visit 3: First Transplant Administration, Week 2

  • Self-collected Vaginal Swab and soft cup collection
  • Pelvic Exam: VMT/placebo Administration
  • Symptom and Sexual Behavior Assessment

Visit 4: Second Transplant Administration, Week 2

  • Self-Administered Vaginal Swab
  • Pelvic Exam: VMT/Placebo Administration
  • Symptom and Sexual Behavior Assessment

Visits 5-10: Post-transplant follow ups, Weeks 3, 5, 7, 11, 15, 27

  • Blood draw (visit 7 only)
  • Self-Administered Vaginal Swab
  • Self-Administered soft cup collection (visit 5, 7 \& 9)
  • Symptom and Sexual Behavior Assessment
  • Pelvic Exam: cervical swabs, cytobrush (visits 7 \& 9)
02

Conditions studied

  • Recurrent Bacterial Vaginosis

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03

Who can participate

Ages eligible
18 Years to 50 Years
Sexes eligible
Female
Accepts healthy volunteers
No

Inclusion criteria

  • Premenopausal women, 18- 50 years old
  • Abnormal Nugent score: > 3
  • History of recurrent bacterial vaginosis (BV) (3 or more documented episodes in past 12 months)
  • If participating in sexual activity that could lead to pregnancy, study participants must agree to use an effective contraceptive while actively participating in the protocol. At least one of the following methods MUST be used:

    • Condoms (male or female), with or without a spermicidal agent
    • Intrauterine device (IUD)
    • Hormonal contraceptive (including oral pills, vaginal ring, implant, injection)

Exclusion criteria

Exclusion Criteria:

  • History of clinically significant vaginal, cervical, or uterine disease including but not limited to: cancer of the female reproductive tract, prior hysterectomy, high grade cervical dysplasia (CIN III), or diagnosed with cervicovaginal infection (with the exception of bacterial vaginosis) within the 30 days prior to the procedure.

    • Allergy to metronidazole
    • Use of investigational therapies or investigational vaccines within 90 days prior to study entry
    • Use of any immunomodulatory agents within 30 days prior to study enrollment. Subject taking any of the following medications: systemic steroids (inhaled or nasal steroid therapy is permitted), interleukins, systemic interferons (e.g. local injection of interferon alpha for treatment of HPV is permitted) or systemic chemotherapy.
    • History of coronary artery disease, myocardial infarction, COPD, chronic renal failure, decompensated cirrhosis, or any other condition that in the opinion of the investigator will compromise ability to participate in the study.
    • History of abnormal pap smear within 12 months
    • Insertion of levonorgestrel-containing IUD within 3 months prior to study entry
    • Either breastfeeding or pregnant within 24 weeks prior to study entry
    • Use of probiotics and prebiotics (supplements and products, oral or vaginal) within 30 days of the study. (NOTE: Oral yogurt with live cultures is allowed.)
    • Routine use of oral antibiotics i.e. daily use for acne, Hidradenitis suppurativa, or regular use for post-coital urinary tract infection prophylaxis within the past 30 days.
    • Taken non-metronidazole antibiotics in last 30 days
    • BMI > 40
04

Study design

Phase
Phase 1 / Phase 2
Primary purpose
Prevention
Allocation
Randomized
Intervention model
Parallel assignment
Masking
Quadruple (Participant, Care provider, Investigator, Outcomes assessor)
Enrollment
62 participants (estimated)

Study arms

  • Active comparator
    Vaginal microbiome transplant

    Women in this group will be randomized to receive two doses of vaginal fluid from a healthy donor

    Biological: Vaginal microbiome transplant · Drug: Oral Metronidazole

  • Placebo comparator
    Saline placebo

    Women in this group will be randomized to receive two doses of sterile saline

    Drug: Oral Metronidazole · Other: Sterile saline

Interventions

  • BiologicalVaginal microbiome transplant

    Vaginal fluid from healthy donors

  • DrugOral Metronidazole

    500mg oral metronidazole twice daily for 7 days

  • OtherSterile saline

    700 uL of sterile saline placed in the vagina as a placebo intervention.

05

What researchers measure

Primary outcomes

  1. Presence of Lactobacillus crispatus-dominant microbiome

    Lactobacillus crispatus dominant = relative abundance of Lactobacillus crispatus in the vaginal microbial community \> 50%

    Time frame: 5 weeks after intervention

Secondary outcomes

  1. Presence of Lactobacillus-dominant microbiome

    Characterization of the vaginal microbial community using 16S rRNA sequencing

    Time frame: 1, 3, 5, 7 weeks, 4 and 6 months after intervention

  2. Number of women reporting adverse events

    Report of adverse events

    Time frame: 1, 3, 5, 7 weeks, 4 and 6 months after intervention

  3. Presence of Lactobacillus crispatus-dominant microbiome

    Characterization of the vaginal microbial community using 16S rRNA sequencing

    Time frame: 1, 3, 7 weeks, 4 and 6 months after intervention

06

Study locations

1 of 1 sites recruiting
  • Massachusetts General Hospital
    Boston, Massachusetts 02114, United States
    Recruiting
07

References and documents

Individual participant data

Plan to share: No

No publications or documents are linked to this record.

08

Registry details

Key details

Study ID
NCT04046900
Lead sponsor
Douglas Kwon
Responsible party
Douglas Kwon (Principle Investigator, Massachusetts General Hospital) — Sponsor-investigator
First posted
Aug 6, 2019
Start date
Apr 22, 2021
Primary completion
Jan 30, 2027 (estimated)
Completion
Jun 30, 2027 (estimated)
Last update
Sep 11, 2026

Study contacts

Doug Kwon, MD, PhD
Contact
dkwon@mgh.harvard.edu
857-268-7009
Doug Kwon, MD, PhD
principal investigator · Massachusetts General Hospital

Oversight

Data monitoring committee
No
FDA-regulated drug
Yes
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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