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CompletedNCT03315403CAPTAINUpdated Apr 8, 2022

Quantitative Polymerase Chain Reaction for Improved Detection of Pneumococci in CAP "CAPTAIN"

An observational study in Pneumonia, Pneumococcal and Community-acquired Pneumonia, sponsored by Medical Center Alkmaar. Completed at 2 sites in Netherlands. Open to participants aged 18 Years and older, including healthy volunteers. Per ClinicalTrials.gov, last updated 2022-04-08.

Sponsored by Medical Center Alkmaar · Observational

Study type
Observational
Model
Cohort
Time perspective
Prospective
Enrollment
922
Ages
18 Years and older
Sex
All
01

Study summary

The purpose of this study is to evaluate the added diagnostic value of a quantitative polymerase chain reaction targeting the lytA gene in detecting pneumococci in patients with community-acquired pneumonia.

02

Conditions studied

  • Pneumonia, Pneumococcal
  • Community-acquired Pneumonia

Keywords

  • quantitative polymerase chain reaction
  • qPCR
  • autolysin
  • lytA
  • Pneumococcal pneumonia
  • Diagnostics
  • Community-acquired Pneumonia
  • Antibiotic resistance
03

In context

Pneumonia, Pneumococcal

44 studies on the registry are indexed under Pneumonia, Pneumococcal; 2 are open to participants now.

Browse Pneumonia, Pneumococcal studies →

Lead sponsor

Medical Center Alkmaar is the lead sponsor of 20 studies on the registry; none are open to participants now.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
18 Years and older
Sexes eligible
All
Accepts healthy volunteers
Yes
Sampling method
Non-probability sample

Study population

Patient group: Adult patients ≥18 years with diagnosis of CAP at the emergency department (ED).

Control groups (without CAP):

  • Related controls (inclusion at ED)
  • Unrelated healthy adults (inclusion at an outpatient preoperative appointment for any elective surgery)
  • Stable COPD patients (inclusion at outpatient clinic for pulmonary diseases)
  • COPD patients with an AECOPD (inclusion at ED)

Go through the criteria one by one — yes, no or not sure — and take the list to your doctor or the study team. Kept in this browser only.

Inclusion criteria

Patients:

  • Age 18 years or above;
  • Presentation at the emergency department (ED);
  • Working diagnosis of CAP at the ED with the presence of at least two of the following criteria:

    1. New or worsened coughing;
    2. Production of purulent sputum or change in sputum colour;
    3. Temperature >38.0 ⁰C or ≤36.0 ⁰C (tympanic);
    4. Auscultatory findings consistent with pneumonia, including rales, evidence of pulmonary consolidation (dullness on percussion, bronchial breath sounds, rales, or egophony), or both;
    5. White blood cell count of >10x10\^9 cells/L or \<4x10\^9 cells/L or >15% bands;
    6. C-reactive protein level ≥30mg/L;
    7. Dyspnea, tachypnea, (>20 breaths per minute), or hypoxemia (arterial pO2 \<60mmHg or peripheral O2 saturation \<90%).
  • New consolidation(s) on the chest radiograph or computed tomography (CT);
  • No other explanation for the signs and symptoms;

Control group 1 - Related controls

  • Being aged 18 years or above;
  • Close relative of the patient: relative defined as living in the same house as the CAP patient or daily contact;
  • Is at the hospital at the moment of inclusion of the CAP patient or is willing to come for testing within 7 days;

Control group 2 - Unrelated healthy individuals

  • Being aged 18 years or above;
  • Subject with a preoperative appointment with the anaesthiologist for a planned surgical procedure;
  • Age matched to a included CAP patient (+-10 years);
  • Time matched to a included CAP patient (up to 14 days after inclusion of the CAP patient);
  • Gender matched to a included CAP patient.

Control group 3 - Patients with stable

  • Being aged 18 years or above;
  • Diagnosis of COPD confirmed with spirometry (GOLD criteria 2017)(76);
  • Stable disease.

Control group 4 - Patients with exacerbation of COPD

  • Being aged 18 years or above;
  • Diagnosis of COPD confirmed with spirometry (GOLD criteria 2017)(76);
  • Diagnosis of exacerbation of COPD: defined as an acute event characterised by a worsening of the patient's respiratory symptoms that is beyond normal day-to-day variations and leads to a change in medication (76).
  • Presentation at emergency department with the suspicion of an exacerbation.

Exclusion criteria

Exclusion Criteria:

In general:

  • Recent pneumonia (\< 1 month) or pneumonia in last 3 months with known pneumococcal aetiology with one of current diagnostics;
  • Was included in the study group before;
  • Not capable of understanding information needed to sign .

Patients:

  • Aspiration pneumonia;
  • Hospitalisation for two or more days in the last 14 days;
  • History of cystic fibrosis.

For all control groups:

  • Fits inclusion criteria for patient group;
  • Present or recent hospitalisation (14 days);
  • Fits inclusion criteria for patient group;
  • Use of antibiotics in the last 14 days, including maintenance antibiotic therapy.

Control group 1 and 2 - Related healthy controls and unrelated healthy individuals

  • Active infectious respiratory complaints defined as defined as two or more respiratory symptoms (cough, nasal congestion, runny nose, sore throat or sneezes);
  • Temperature >38.0 ⁰C;
  • Fits inclusion criteria for control group 3 or 4;
  • Chronic pulmonary disease: , asthma, cystic fibrosis, bronchiectasis.

Control group 3 - Patients with stable COPD

  • Temperature >38.0 ⁰C;
  • Stable disease;
  • Fits inclusion criteria for control group 4;
  • Recent exacerbation (\<1 month) defined as increased respiratory symptoms with need of antibiotic and/or therapy;
  • History of cystic fibrosis.

Control group 4 - Patients with exacerbation of COPD

  • Current pneumonia;
  • Recent exacerbation (\<1 month) defined as increased respiratory symptoms with need of antibiotic and/or corticosteroid therapy;
  • Fits inclusion criteria for control group 3;
  • History of cystic fibrosis.
Terms in these criteria, in plain language(3)

Underlined terms in the criteria open these too. Explained by clinicaltrials.gg, not part of the registry record. The study team decides who can take part.

COPD

Chronic obstructive pulmonary disease: long-term lung disease that makes it hard to breathe out, including emphysema and chronic bronchitis.

Informed consent

Before you join, the study team explains what taking part involves — its purpose, what happens, the risks and possible benefits — and answers your questions, so you can decide freely. Consent is usually recorded on a form (the informed consent form, ICF) signed by you or, where the law allows, by someone legally authorised to decide for you.

You can keep asking questions during the study, you are told of new information that matters, and you can choose to leave at any time.

Corticosteroids (steroids)

Anti-inflammatory medicines such as prednisone, prednisolone and dexamethasone — not the anabolic steroids used for muscle.

Studies differ in what they allow: check which steroid medicines, routes (tablets, injections, creams, inhalers, eye drops) and doses this study accepts.

05

Study design

Observational model
Cohort
Time perspective
Prospective
Enrollment
922 participants (actual)
Patient registry
No
Biospecimen retention
Samples with dna

Groups and cohorts

  • Patients with CAP

    Patients with a diagnosis of radiographically-confirmed CAP at the emergency department will undergo the usual diagnostics. For the study an extra nasopharynx sample, saliva sample and blood sample will be collected. A questionnaire will be filled in. LytA qPCR and cultures will be performed on samples of the upper respiratory tract (nasopahrynx, oropharynx, saliva, sputum if available)

    Diagnostic Test: LytA targeted quantitative polymerase chain reaction (qPCR)

  • Related controls

    Of related controls a nasopharynx sample, oropharynx sample and saliva sample will be collected. A questionnaire will be filled in. LytA qPCR and cultures will be performed on samples of the upper respiratory tract (nasopahrynx, oropharynx, saliva)

    Diagnostic Test: LytA targeted quantitative polymerase chain reaction (qPCR)

  • Unrelated controls

    Of unrelated controls a nasopharynx sample, oropharynx sample and saliva sample will be collected. A questionnaire will be filled in. LytA PCR and cultures will be performed on samples of the upper respiratory tract (nasopahrynx, oropharynx, saliva)

    Diagnostic Test: LytA targeted quantitative polymerase chain reaction (qPCR)

  • Patients with stable COPD

    Of stable COPD patients a nasopharynx sample, oropharynx sample and saliva sample will be collected. And if available also a sputum sample. A questionnaire will be filled in. LytA qPCR and cultures will be performed on samples of the upper respiratory tract (nasopahrynx, oropharynx, saliva, sputum if available)

    Diagnostic Test: LytA targeted quantitative polymerase chain reaction (qPCR)

  • Patients with exacerbation of COPD

    Of patients with a diagnosis of an exacerbation of COPD at the emergency department a nasopharynx sample, oropharynx sample and saliva sample will be collected apart from the usual diagnostics. If available also a sputum sample will be collected. A questionnaire will be filled in. LytA qPCR and cultures will be performed on samples of the upper respiratory tract (nasopahrynx, oropharynx, saliva, sputum if available)

    Diagnostic Test: LytA targeted quantitative polymerase chain reaction (qPCR)

Interventions

  • Diagnostic testLytA targeted quantitative polymerase chain reaction (qPCR)

    LytA qPCR and cultures will be performed on samples of the upper respiratory tract (nasopahrynx, oropharynx, saliva, sputum if available)

06

What researchers measure

Primary outcomes

  1. qPCR diagnosed pneumococcal pneumonia

    Occurrence of qPCR proven pneumococcal pneumonia (CAP with S. pneumoniae detected by qPCR in at least one of the samples with a positive lytA qPCR and a DNA copy number above the determined cut-off value) using the cut-off value in at least one of the specimens at inclusion. The cut-off value will be determined in this study, see secondary objective.

    Time frame: 1 day, day of inclusion

  2. Pneumococcal pneumonia with usual tests

    Occurrence of pneumococcal pneumonia proven by at least one of the routine microbiological tests (urine antigen test, blood culture and/or sputum culture). The difference between outcome measure 1 and 2 is the added diagnostic value.

    Time frame: 1 day, day of inclusion

Secondary outcomes

  1. Number of DNA copies of S. pneumoniae in all lytA qPCR positive study subjects

    The number of DNA copies of every study subject with a positive qPCR will be determined. The optimal cut-off value will be determined to distinguish between colonisation and infection by comparing the number of DNA copies of controls with a positive lytA PCR and patients with a pneumococcal pneumonia proven by routine microbiological tests. This cut-off value will be used for outcome measure 1 to determine the amount of patients with an qPCR proven pneumococcal pneumonia.

    Time frame: 1 day, day of inclusion

  2. Occurrence of positive lytA qPCR at 30 days after inclusion in CAP patients

    Occurrence of positive lytA qPCR at 30 days after inclusion in CAP patients in the different samples: oropharynx, nasopharynx, saliva and sputum.

    Time frame: 30 days

  3. CURB-65 scores

    CURB-65 scores will be determined in CAP patients at moment of inclusion.

    Time frame: 1 day, day of inclusion

  4. Procalcitonin

    Procalcitonin levels will be determined in CAP patients at moment of inclusion.

    Time frame: 1 day, day of inclusion

07

Study locations

2 sites
  • Spaarne Gasthuis
    Haarlem, Noord-Holland, Netherlands
  • Noordwest Ziekenhuisgroep
    Alkmaar, Netherlands
08

Updates

Tracking since Sep 25, 2026
No changes since tracking began. The registry record was last updated on Apr 8, 2022, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
09

Registry details

Key details

Study ID
NCT03315403
Lead sponsor
Medical Center Alkmaar
Responsible party
W.G.Boersma (MD. PhD. Pulmonologist, Medical Center Alkmaar) — Principal investigator
First posted
Oct 20, 2017
Start date
Apr 5, 2018
Primary completion
Mar 12, 2020
Completion
Mar 12, 2020
Last update
Apr 8, 2022

Study contacts

Wim Boersma, MD. PhD.
principal investigator · Noordwest Ziekenhuisgroep

Oversight

Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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