A Phase 1/2 interventional study of Biopsy Procedure and Biospecimen Collection in Burkitt Lymphoma, Double-Expressor Lymphoma and High Grade B-Cell Lymphoma With MYC and BCL2 and/or BCL6 Rearrangements, sponsored by National Cancer Institute (NCI). Recruiting at 8 sites in United States. Open to participants aged 18 Years and older. Per ClinicalTrials.gov, last updated 2026-10-06.
Sponsored by National Cancer Institute (NCI) · Phase 1/2, Interventional, and Treatment
This phase Ib/II trial tests the safety, side effects, best dose and how well giving CX-5461 works for the treatment of patients with B-cell non-Hodgkin lymphoma. CX-5461 may stop the growth of cancer cells by blocking some of the enzymes needed for cell growth. Giving CX-5461 may be safe, tolerable and/or effective in treating patients with B-cell non-Hodgkin lymphoma.
PRIMARY OBJECTIVES:
I. To define dose limiting toxicity (DLT). (Phase 1) II. To assess toxicity profile. (Phase 1) III. To determine the recommended phase 2 dose (RP2D). (Phase 1) IV. To perform pharmacokinetic (PK) studies. (Phase 1) V. To examine the effect of CX-5461 (Pidnarulex) on gene expression profile of MYC aberrant lymphomas. (Phase 1) VI. To determine the objective response rate (ORR) (complete response [CR] and partial response [PR]). (Phase 2)
SECONDARY OBJECTIVE:
I. To observe and record anti-tumor activity. (Phase 1 and 2)
EXPLORATORY OBJECTIVES:
I. To determine the mechanisms of response and resistance using circulating tumor deoxyribonucleic acid (ctDNA). (Phase 1 and 2) II. To observe cerebral spinal fluid (CSF) distribution of CX-5461 (Pidnarulex). (Phase 1 and 2)
OUTLINE: This is a phase 1 dose-escalation study of CX-5461 followed by a phase 2 study.
Patients receive CX-5461 intravenously (IV) over 60 minutes on days 1 and 8 of each cycle. Cycles repeat every 21 days in the absence of disease progression or unacceptable toxicity. Patients undergo lumbar puncture with cerebrospinal fluid (CSF) collection on study and positron emission tomography (PET) scan/computed tomography (CT) scan, tumor biopsy, and blood sample collection throughout the study.
After completion of study treatment, patients are followed up at 30 days, every 3-4 months for the first 2 years, and every 6 months for years 3-5.
391 studies on the registry are indexed under Burkitt Lymphoma; 113 are open to participants now.
This study's planned enrollment of 50 is above the median of 41 across 353 interventional studies indexed under Burkitt Lymphoma.
Browse Burkitt Lymphoma studies →National Cancer Institute (NCI) is the lead sponsor of 3,506 studies on the registry; 334 are open to participants now.
Of its 402 completed or terminated interventional studies of FDA-regulated products, 365 (91%) have results posted.
Counted across the registry records on this site, refreshed daily.
Total bilirubin ≤ 1.5 institutional upper limit of normal (ULN)
Exclusion Criteria:
Patients receive CX-5461 IV over 60 minutes on days 1 and 8 of each cycle. Cycles repeat every 21 days in the absence of disease progression or unacceptable toxicity. Patients undergo lumbar puncture with CSF collection on study and PET scan/CT scan, tumor biopsy, and blood sample collection throughout the study.
Procedure: Biopsy Procedure · Procedure: Biospecimen Collection · Procedure: Computed Tomography · Procedure: Lumbar Puncture · Drug: Pidnarulex · Procedure: Positron Emission Tomography
Undergo tumor biopsy
Also known as: Biopsy, BIOPSY_TYPE, Bx
Undergo CSF and blood sample collection
Also known as: Biological Sample Collection, Biospecimen Collected, Sample Collection, Specimen Collection
Undergo PET/CT scan
Also known as: CAT, CAT Scan, Computed Axial Tomography, Computerized Axial Tomography, Computerized axial tomography (procedure), Computerized Tomography, Computerized Tomography (CT) scan, CT, CT Scan, Diagnostic CAT Scan, Diagnostic CAT Scan Service Type, tomography
Undergo lumbar puncture
Also known as: LP, Spinal Tap
Given IV
Also known as: CX-5461, CX5461, Pol I Inhibitor CX5461, RNA Pol I Inhibitor CX5461
Undergo PET/CT scan
Also known as: Medical Imaging, Positron Emission Tomography, PET, PET Scan, Positron emission tomography (procedure), Positron Emission Tomography Scan, Positron-Emission Tomography, PT
Incidence of adverse events (Phase 1)
Assessed by the Common Terminology Criteria for Adverse Events version 5. Safety will be summarized overall, by actual dose level in Phase 1b.
Time frame: Up to 30 days after last dose of study treatment
Recommended phase 2 dose (RP2D) (Phase 1)
Time frame: Up to 5 years
Pharmacokinetic (PK) levels (Phase 1)
Assessed using Liquid Chromatography Mass Spectrometry (LC-MS).
Time frame: At cycle (C) 1 day (D) 8 at pre-dose, end of infusion, and 2 hours (hrs) post-dose; on C1D9 at 24 hrs post C1D8 infusion; on C1D10 at 48 hrs post C1D8 infusion; on C1D11 at 72 hrs post C1D8 infusion; and on C1D15 at 167 hrs post C1D8 infusion
Gene expression (Phase 1)
Assessed by ribonucleic acid sequencing complemented by whole exome sequencing using an average absolute log2 fold change relative to baseline with a significance threshold of p \< 0.05.
Time frame: At baseline, C1D9 or C1D10 (within 24-48 hrs of C1D8 dosing),and at progression
Overall response rate (Phase 2)
Assessed using standard radiographic criteria according to Lugano criteria. Phase 2 results will be reported at the RP2D.
Time frame: Up to 5 years
Response to therapy (Phase 1 and 2)
Assessed according to Lugano criteria.
Time frame: Up to 5 years
Circulating tumor deoxyribonucleic acid sequencing (Phase 1 and 2)
Time frame: At baseline, day 21 of cycle 1, and complete remission
PK levels of cerebrospinal fluid (Phase 1 and 2)
Using LC-MS.
Time frame: At C1D8 2 hours post dose
Plan to share: Yes — NCI is committed to sharing data in accordance with NIH policy. For more details on how clinical trial data is shared, access the link to the NIH data sharing policy page.
No publications or documents are linked to this record.
From the registry record's own update history. This site started tracking changes on Sep 25, 2026; for anything earlier, see the record history on ClinicalTrials.gov ↗
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