ClinicalTrials.gg
RecruitingNCT06360913BUSARDUpdated Apr 12, 2024

Blood Spot and Urine Metabolomic Screening Applied to Rare Diseases

An interventional study of High resolution mass spectrometry in Inborn Errors of Metabolism and Rare Diseases, sponsored by Cliniques universitaires Saint-Luc- Université Catholique de Louvain. Recruiting at 4 sites in Belgium. Open to participants aged 1 Day to 99 Years, including healthy volunteers. Per ClinicalTrials.gov, last updated 2024-04-12.

Sponsored by Cliniques universitaires Saint-Luc- Université Catholique de Louvain · Not applicable, Interventional, and Diagnostic

From the registry’s dates

  • Started Jan 2024; still recruiting 2 years 10 months later.
Phase
Not applicable
Study type
Interventional
Enrollment
2,286
Allocation
Not applicable
Ages
1 Day to 99 Years
Sex
All
01

Study summary

The primary goal of this study is to establish a biobank of dried blood spots and urines from a large control cohort and collect several cohorts as large as possible of patients affected or suspected of being affected by rare diseases (mainly hereditary metabolic diseases) or by autism spectrum disorders.

A metabolomic database using a high-resolution mass spectrometer (i.e. the "Device") will be generated and specific biomarkers for the diseases will be confirmed or uncovered. The ultimate goal is to facilitate and improve the diagnosis and screening of the patients affected by these disorders, but also to improve the knowledge about the biochemical mechanisms involved over the course of the selected pathologies.

High-resolution mass spectrometry allows the measurement of thousands of metabolites in a single analysis. The current biochemical tests used for the diagnosis of hereditary metabolic diseases are only using a combination of maximum a few dozens of biomarkers in one analysis.

Objectives Unravel new biomarkers for diagnosis (+/- explore the altered pathways...) Uncover and/or validate newborn screening biomarkers through retrospective analysis of preserved newborn DBS from confirmed patients (useful for first or second tier biochemical NBS testing!) Validation of LC-MS qTOF for metabolomics screening as first line diagnostic test (thousands of metabolites) using diagnostic algorithms (modified z-scores) \& continuous optimization by adding new cases and new controls in the database Generation of a biobank of urines and DBS from rare diseases (IEMs) \& from a large reference population useful for other research applications

Read the detailed description

DESIGN OF THE CLINICAL INVESTIGATION

Interventional multicenter study using high-resolution mass spectrometry applied to dried blood spots and urine samples, generating metabolomic data.

The study will start by the establishment of a biobank according to group description.

The samples (dried blood spots (DBS) and urine samples for each subject) will be collected in respective co-investigator centers, before being shipped to the central biobank of Cliniques universitaires Saint Luc (CUSL). DBS are allowed to be kept at room temperature (dry and protected from light) if shipped to CUSL within 2 weeks upon sampling.

The sampling procedure, occurring at each co-investigating center will include in the following order:

  • Information about the study (explanations by the investigator or his/her delegate)
  • Collection of informed consent forms to participate including agreement of multiple sampling at another time point (for groups II and III only)
  • A confidential medical questionnaire/CRF will be collected (reduced form for subjects in the Group 1-control)
  • DBS and urine sampling. Subjects for which only neonatal DBS is available will be accepted as well.

The identity and participation of the subjects in the experimentation will remain strictly confidential in accordance with the European General Data Protection Regulation of April 27, 2016 (in application since May 25, 2018), the Belgian law of July 30, 2018 on the protection of privacy with regard to the processing of personal data, as well as the law of August 22, 2002 on the rights of patients. Personal data will be coded. Subjects will not be identified by name or in any other recognisable way in any of the records, results or publications related to the experimentation.

The investigators of the study will identify the potential subjects, that seem to meet the eligibility criteria.

The medical doctor or delegate will explain the study. Then, if the subject and/or the parents agree, the informed consent will be signed before any sampling.

Multiple sampling at different time points will be allowed for a single informed consent form (ICF).

The co-investigator centers will temporarily keep pseudonymized samples and will send periodically the accumulated samples (frozen) to the CUSL laboratory (for biobanking). The samples will be stored at -80°C in CUSL biobank before and after analysis. The time of reception and transfer at -80°C at CUSL will be Recorded in REDCAP.

Later, generation of datasets representative of the metabolome in DBS and urine samples by liquid chromatography coupled to high resolution mass spectrometry (LC-MS-q-TOF) analysis will be performed.

The metabolomics analysis by LC-MS-q-TOF will use a SYNAPT-XS instrument from Waters. Several columns will be used in negative and positive electrospray acquisition modes, allowing the generation of complementary metabolomic datasets containing several thousands of features ranged by exact mass (m/z) (including spectra after energy collision) and retention time measurements. Quality controls and pooled samples will be analyzed at each batch of run during the metabolomics study.

After data analysis using progenesis QI, Unifi and R-package for metabolomics analysis, the results will be discussed and shared with the co-investigators and the expected results will hopefully be published in a peer-reviewed journal. If necessary (i.e. to confirm genetically an unusual metabolomic profile or a secondary finding) and if the consent is obtained from the patient, complementary biochemical testing on initial DBS and/or urine samples; and genetic testing from the DBS will be performed, upon discussion and agreement with the co-investigators of the study. If required (i.e. if a new diagnosis is suspected biochemically and/or genetically), subjects will be contacted after agreement of the co-investigators of the study.

The samples needed for this study will be divided into 3 main groups, each subdivided according to age categories; the first group is the main healthy group (Group 1) allowing to generate a reference metabolomic database. The two other groups correspond to groups of patients with pathologies whose diagnosis is either confirmed (Group 2) or suspected (Group 3).

Total expected: 3366 subjects

  • 30 for technical optimization (additionally to DBS and urine, whole blood tubes will be sampled)
  • 1080 residual human body material (RHBM) from newborn screening centres (group 1)
  • 1056 controls (group 1)
  • 1200 patients (groups 2 and 3)

The minimum number of samples necessary to generate a reference interval using a non-parametric method is 120 samples according to CLSI28-A3C guidelines. Therefore, the investigators set a target of minimum 120 samples collected per category of age. Samples will be equitably distributed by sex, season and participating centers (thus, geographical origin). For the newborn categories, since the easier availability of large number of control samples using anonymized residual samples from newborn screening centers, the target number of control samples will be larger. On the other hand, urines samples won't be collected for subjects for newborn categories.

Group 2 includes individuals with a known pathology whose diagnosis is confirmed by a genetic test (genetic variant(s) considered as pathogenic or likely pathogenic according to American College of Human Genetics classification) or a biochemical reference test associated to a typical clinical feature. For autism spectrum disorders, recruited patients should be included according to the Diagnostic and Statistical Manual (DSM) V classification. Subgroups are defined according to the pathology affecting each individual (classification according to the affected gene, mode of inheritance and type of mutation); the primarily target pathologies considered are genetic metabolic diseases, but other rare diseases and autism spectrum disorders are also targeted.

Group 3 includes individuals for whom an rare disease is suspected based on the clinical data but not confirmed (including patients for whom the genetic and biochemical tests are still in progress or inconclusive). If the status of an individual changes before the end of the study after the confirmation of a diagnosis communicated anonymously by the recruiting co-investigator (due to results obtained independently outside the study) or due to the results of the study (specific biomarkers and/or scoring and/or genetic confirmation using second tier testing) the subject will then be transferred to its corresponding group 2. These patients will be recruited in all the participating centers.

02

Conditions studied

  • Inborn Errors of Metabolism
  • Rare Diseases
03

In context

Metabolism, Inborn Errors

152 studies on the registry are indexed under Metabolism, Inborn Errors; 22 are open to participants now.

This study's planned enrollment of 2,286 is above the median of 26 across 89 interventional studies indexed under Metabolism, Inborn Errors.

Browse Metabolism, Inborn Errors studies →

Lead sponsor

Cliniques universitaires Saint-Luc- Université Catholique de Louvain is the lead sponsor of 350 studies on the registry; 64 are open to participants now.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
1 Day to 99 Years
Sexes eligible
All
Accepts healthy volunteers
Yes

Go through the criteria one by one — yes, no or not sure — and take the list to your doctor or the study team. Kept in this browser only.

Inclusion criteria

  • Subjects from newborn to elderly, presumably not affected by a rare disease (Group 1) (Newborns: only residual DBS from newborn screening from full-term newborns and with a negative official newborn screening test, de-identified samples not requiring an ICF, no urine sample for this category), OR
  • Patients from newborn to elderly, affected by a genetic metabolic disease (genetic confirmation is required) or another confirmed rare disease for which a metabolic derangement is suspected (Group 2), OR
  • Patients from newborn to elderly, affected by autism spectrum disorders and evaluated according to the DSMV classification (Group 2), OR
  • Patients suspected of being affected by a genetic metabolic disease or another rare disease with potential metabolic derangement (i.e. for which genetic and/or biochemical test(s) are non-conclusive or in progress) (Group 3)

Exclusion criteria

Exclusion Criteria:

  • Subjects or patients for which the data required for analysis and assignment in the correct subgroup are lacking
  • No signed
Terms in these criteria, in plain language(1)

Underlined terms in the criteria open these too. Explained by clinicaltrials.gg, not part of the registry record. The study team decides who can take part.

Informed consent

Before you join, the study team explains what taking part involves — its purpose, what happens, the risks and possible benefits — and answers your questions, so you can decide freely. Consent is usually recorded on a form (the informed consent form, ICF) signed by you or, where the law allows, by someone legally authorised to decide for you.

You can keep asking questions during the study, you are told of new information that matters, and you can choose to leave at any time.

05

Study design

Phase
Not applicable
Primary purpose
Diagnostic
Allocation
Not applicable
Intervention model
Single group
Masking
None (open label)
Enrollment
2,286 participants (estimated)

Study arms

  • Experimental
    Metabolomics evaluation

    LC-MS-qTOF analysis of DBS and urine using a combination of methods

    Diagnostic Test: High resolution mass spectrometry

Interventions

  • Diagnostic testHigh resolution mass spectrometry

    Metabolomics study

06

What researchers measure

Primary outcomes

  1. Uncover new biomarkers in dried blood spots and urines samples able to improve the diagnosis of rare diseases

    Comparison of metabolics data containing thousands of biomarker candidates obtained by LC-MS-qTOF analysis between rare disease cohorts and age-matched control samples

    Time frame: 4 years

07

Study locations

1 of 4 sites recruiting
  • Hôpital Universitaire des enfants Reine Fabiola (HUDERF-ULB)
    Brussels, B-1020, Belgium
    Not yet recruiting
    • Lionel Marcélis, MSc, Ph.D. · Principal investigator
    • Aurélie Empain, M.D., Ph.D. · Principal investigator
    • Corinne De Laet, M.D., Ph.D. · Sub investigator
    • Ebru Surgun, M.D. · Sub investigator
    • Céline Morelli, M.D. · Sub investigator
  • Cliniques universitaires Saint Luc
    Brussels, B-1200, Belgium
    Recruiting
    • Joseph P. Dewulf, M.D., Ph.D. · Principal investigator
    • Marie-Cécile Nassogne, M.D., Ph.D. · Principal investigator
    • Xavier Stephenne, M.D., Ph.D. · Sub investigator
    • Nicole Revencu, M.D., Ph.D. · Sub investigator
    • Stéphanie Paquay, M.D. · Sub investigator
  • Institut de Pathologie et de Génétique (IPG)
    Charleroi, B-6041, Belgium
    Not yet recruiting
    • Dominique Roland, M.D. · Principal investigator
    • Damien Lederer, M.D., Ph.D. · Sub investigator
    • Isabelle Maystadt, M.D., Ph.D. · Sub investigator
  • CHU Liege
    Liège, B-4000, Belgium
    Not yet recruiting
    • François-Guillaume Debray, MD PhD · Principal investigator
    • François Boemer, Pharm D PhD · Principal investigator
    • Caroline Dadoumont, MD · Sub investigator
08

Timeline

Tracking since Sep 25, 2026
ElapsedEstimatedEstimated, not yet reached

Started Jan 2024 (actual). Primary completion is estimated for Jan 2028, 48 months after the start.

How these figures are worked out, and which studies are left out of them.

Registered
Jan 31, 2024
First posted
Apr 11, 2024
StartActual
Jan 3, 2024
Primary completionEst.
Jan 2028
CompletionEst.
Jan 2028
Last update
Apr 12, 2024
What these dates mean
Start.
When the first participant enrolled; while estimated, when the study expects to open to recruitment.
Primary completion.
When the last participant was examined or treated to collect data for the study's main question, its primary outcome. A study that stopped early gives the date its data collection stopped.
Completion.
When the last participant's last visit took place, for every outcome, secondary ones and side effects included: the end of the study. Often later than primary completion, sometimes the same day.
Actual and Est.
Actual means the registry says the date has happened. Est. (estimated) is a date the sponsor plans or expects. It can still move, and the sponsor is expected to change it to actual once it has passed.
No changes since tracking began. The registry record was last updated on Apr 12, 2024, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
09

Registry details

Key details

Study ID
NCT06360913
Responsible party
Sponsor
First posted
Apr 11, 2024
Start date
Jan 3, 2024
Primary completion
Jan 2028 (estimated)
Completion
Jan 2028 (estimated)
Last update
Apr 12, 2024

Study contacts

Joseph P Dewulf, M.D., Ph.D.
Contact
Etdclin.Busard@saintluc.uclouvain.be
02/7646836
Joseph P Dewulf, M.D., Ph.D.
principal investigator · Cliniques universitaires Saint-Luc

Oversight

Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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