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RecruitingNCT06257004GEMSUpdated Feb 13, 2024

Genome-wide Epistasis for Cardiovascular Severity in Marfan Study

An observational study in Marfan Syndrome and FBN1 Mutation, sponsored by University Hospital, Antwerp. Recruiting at 1 site in Belgium. Per ClinicalTrials.gov, last updated 2024-02-13.

Sponsored by University Hospital, Antwerp · Observational

From the registry’s dates

  • Primary completion was expected by Oct 2025, 11 months ago, but the record still lists the study as recruiting.
  • Started Nov 2020; still recruiting 5 years 10 months later.
Study type
Observational
Model
Case-control
Time perspective
Prospective
Enrollment
200
Sex
All
01

Study summary

Marfan syndrome (MFS) is an autosomal dominant connective tissue disorder with pleiotropic manifestations in the ocular, skeletal and cardiovascular systems. Morbidity and mortality are mostly determined by aortic root aneurysm dissection and rupture. Although mutations in FBN1, the gene coding for the extracellular matrix protein fibrillin-1, are the well-established genetic cause of this condition, there is a very poor correlation between the nature or location of the causal FBN1 mutation and the phenotypical outcome. Indeed, wide intra- and interfamilial phenotypical variability is observed. So, even with an identical primary mutation in all family members, the clinical spectrum varies widely, from completely asymptomatic to sudden death due to aortic dissection at a young age. The precise mechanisms underlying this variability remain largely elusive.

Consequently, a better understanding of the functional effects of the primary mutation is highly needed and the identification of genetic variation that modifies these effects is becoming increasingly important. In this project, we have carefully selected different innovative strategies to discover mother nature's own modifying capabilities with respect to Marfan syndrome aortopathy.

Read the detailed description

In this project we will focus on the cardiovascular, or more specific, the TAAD (Thoracal Aorta Aneurysma Dissection) expressivity of the Marfan syndrome. The most frequent mutations in FBN1 (fibrilin-1 ), with significant aortopathy expressivity is p.Ile2585Thr; c.7754T>C and p.Ala882Val; c.2645C>T). We will limit the used population to p.Ile2585Thr; c.7754T>C mutation since this is the biggest population.

Marfan syndrome subjects carrying an identical FBN1 mutation show a variable aortopathy expressivity, even within one family. We hypothesize that the cardiovascular phenotypical variability is under control of genetic modifiers.

The first approach strategy involves ranking of carriers of the specific FBN1 mutation that present with significant variable aortopathy expressivity according to the severity of aortic aneurysma disease (based on Z-score, timing of surgery and manual expert curation). We will stratify these mutation carrying individuals in three groups: mild or no aortic disease (UMC, unaffected mutation carrier)), severely affected (AMC, affected mutation carrier), and participants with indeterminate data.

The second approach is the molecular characterisation of the 25% extreme cohort (AMC and UMC) using WGS (Whole Genome Sequencing) and linkage analysis.

Finally subjects peripheral blood mononuclear cells (PBMCs) of 10 severely affected mutation carrier (AMC) and 10 unaffected mutation carriers (UMC) as well as 2 controls will be reprogrammed to iPSCs (induced Pluripotential Stem Cells). These cells will finally be differentiated into VSMC's (VasculairSmoth Muscle Cells). The genomic integrity and identity of the iPSCs and the VSMCs will be validated using RT-PCR and immunocytochemistry.

Transcriptomic (i.e. RNA-sequencing) data will be acquired from these specific induced pluripotent stem cell-derived vascular smooth muscle cells (iPSC-VSMCs).

We will be able to filter the WGS data based on variant quality and location in genes that are differentially expressed when comparing the AMC and UMC iPSC-VSMCs, via the synchronization of both data types. This approach will allow us to identify the modifier gene. Once candidate modifier genes (and hence candidate modifier variants) have been identified, their modifying capacity will be functionally checked in relevant cell- or animal models. The choice of the model system will be determined based on the nature of the identified modifier. In an animal model, we will prove its effect by crossing an animal carrying the variant of interest with a MFS model, which should significantly alter the cardiovascular phenotype. Depending on the function and evolutionary conservation of the identified modifier gene, zebrafish or mouse models will be used.

Alternatively, the identified modifier will be functionally validated using the cutting-edge CRISPR/Cas9 genome editing technology in the available and thoroughly functionally characterized iPSC-VSMC lines.

Further evidence for a modifying role of the most interesting candidate genes will be obtained by performing targeted re-sequencing of these genes' coding and regulatory sequences in, again, the 25% most and least severely cardiovascular affected MFS cases of a large replication cohort consisting of more than 3000 clinically and molecularly (FBN1 mutation-positive) characterized index cases.

Whenever possible, segregation of the remaining candidate modifier variants with protection from TAAD will be investigated in available gDNA samples of the probands' relatives carrying the FBN1 mutation.

02

Conditions studied

  • Marfan Syndrome
  • FBN1 Mutation

Keywords

  • p.Ile2585Thr;c.7754T>C
  • Rare disease
  • Aortopathies
  • TAAD
  • Congenital abnormalities
  • Genetic modifiers
  • Thoracic aortic disease
  • Thoracic aortic rupture
03

In context

Marfan Syndrome

71 studies on the registry are indexed under Marfan Syndrome; 16 are open to participants now.

This study's planned enrollment of 200 is above the median of 119 across 40 observational studies indexed under Marfan Syndrome.

Browse Marfan Syndrome studies →

Lead sponsor

University Hospital, Antwerp is the lead sponsor of 234 studies on the registry; 68 are open to participants now.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
Child (0–17), Adult (18–64), Older adult (65+)
Sexes eligible
All
Accepts healthy volunteers
No
Sampling method
Probability sample

Study population

participants with Marfan syndrom

Inclusion criteria

  • Participants with proven mutation (p.Ile2585Thr;c.7754C>T) in the FBN1 gene

Exclusion criteria

Exclusion Criteria:

-

05

Study design

Observational model
Case-control
Time perspective
Prospective
Enrollment
200 participants (estimated)
Patient registry
No
Biospecimen retention
Samples with dna

Groups and cohorts

  • AMC (Affected Mutation Carrier)

    FBN1 mutation (Marfan Syndrome) - Phenotype cardiovascular severe outcome

    Genetic: Saliva collection (screening of all participants) · Genetic: Bloodsampling

  • UMC (Unaffected Mutation Carrier)

    FBN1 mutation (Marfan Syndrome) - Phenotype cardiovascular mild outcome

    Genetic: Saliva collection (screening of all participants) · Genetic: Bloodsampling

Interventions

  • GeneticSaliva collection (screening of all participants)

    All participants will give a salive sample (self-sampling kit) - selection of 25% extremes (UMC and AMC) participants for WGS and linkage analysis

  • GeneticBloodsampling

    Based on the results of the WGS, a selection will be made of the 5% most extremes (UMC and AMC) participants for the iPSC-VSMC generation

06

What researchers measure

Primary outcomes

  1. Molecular characterization of the assembled 25% extreme ends cohort (UMC and AMC).

    Whole Genome Sequencing (WGS) and linkage analysis will be used for this purpose

    Time frame: September 2023

Secondary outcomes

  1. Omics integration for modifier identification in the 5% extreme ends of the cohort (UMC and AMC)

    The modifier genes will be identified by the generation of iPSC-VSMC's of MFS individuals from the 5% extreme ends of the spectrum.

    Time frame: September 2023

  2. Functional validation of the modifiers.

    For the validation of the modifiers the CRISP/Cas9 gene editing technology will be used.

    Time frame: 2024

  3. Replication of the identified modifiers in a large MFS cohort Time frame: December 2024

    The evidence for a modifying role of the most interesting candidate genes will be obtained by performing targeted re-sequencing of these genes again in the 25% most and least severely cardiovascular affected MFS cases of a large replication cohort consisting of more than 3000 clinically and molecularly characterized index participants.

    Time frame: 2024

07

Study locations

1 of 1 sites recruiting
  • University Hospital Antwerp
    Edegem, Prins Boudewijnlaan 43/6 2650, Belgium
    • Bart Loeys · Contact · bart.loeys@uantwerpen.be · +3232759768
    • Paul Coucke · Contact · paul.coucke@ugent.be · +3293323634
    • Julie De Backer, Prof,MD,PhD · Sub investigator
    • Laura Muiño Mosquera, MD,PhD · Sub investigator
    • Josephina Meester, MD,PhD · Sub investigator
    • Aline Verstraeten, MD,PhD · Sub investigator
    Recruiting
08

References and documents

Publications

  • Verstraeten A, Luyckx I, Loeys B. Aetiology and management of hereditary aortopathy. Nat Rev Cardiol. 2017 Apr;14(4):197-208. doi: 10.1038/nrcardio.2016.211. Epub 2017 Jan 19. PubMed 28102232 ↗
  • von Kodolitsch Y, De Backer J, Schuler H, Bannas P, Behzadi C, Bernhardt AM, Hillebrand M, Fuisting B, Sheikhzadeh S, Rybczynski M, Kolbel T, Puschel K, Blankenberg S, Robinson PN. Perspectives on the revised Ghent criteria for the diagnosis of Marfan syndrome. Appl Clin Genet. 2015 Jun 16;8:137-55. doi: 10.2147/TACG.S60472. eCollection 2015. PubMed 26124674 ↗
  • Groth KA, Gaustadnes M, Thorsen K, Ostergaard JR, Jensen UB, Gravholt CH, Andersen NH. Difficulties in diagnosing Marfan syndrome using current FBN1 databases. Genet Med. 2016 Jan;18(1):98-102. doi: 10.1038/gim.2015.32. Epub 2015 Mar 26. PubMed 25812041 ↗
  • Loeys BL, Dietz HC, Braverman AC, Callewaert BL, De Backer J, Devereux RB, Hilhorst-Hofstee Y, Jondeau G, Faivre L, Milewicz DM, Pyeritz RE, Sponseller PD, Wordsworth P, De Paepe AM. The revised Ghent nosology for the Marfan syndrome. J Med Genet. 2010 Jul;47(7):476-85. doi: 10.1136/jmg.2009.072785. PubMed 20591885 ↗
  • Braverman AC. Medical management of thoracic aortic aneurysm disease. J Thorac Cardiovasc Surg. 2013 Mar;145(3 Suppl):S2-6. doi: 10.1016/j.jtcvs.2012.11.062. Epub 2012 Dec 20. PubMed 23260459 ↗
  • De Backer J, Loeys B, Leroy B, Coucke P, Dietz H, De Paepe A. Utility of molecular analyses in the exploration of extreme intrafamilial variability in the Marfan syndrome. Clin Genet. 2007 Sep;72(3):188-98. doi: 10.1111/j.1399-0004.2007.00845.x. PubMed 17718856 ↗
  • Franken R, Teixido-Tura G, Brion M, Forteza A, Rodriguez-Palomares J, Gutierrez L, Garcia Dorado D, Pals G, Mulder BJ, Evangelista A. Relationship between fibrillin-1 genotype and severity of cardiovascular involvement in Marfan syndrome. Heart. 2017 Nov;103(22):1795-1799. doi: 10.1136/heartjnl-2016-310631. Epub 2017 May 3. PubMed 28468757 ↗
  • Renard M, Muino-Mosquera L, Manalo EC, Tufa S, Carlson EJ, Keene DR, De Backer J, Sakai LY. Sex, pregnancy and aortic disease in Marfan syndrome. PLoS One. 2017 Jul 14;12(7):e0181166. doi: 10.1371/journal.pone.0181166. eCollection 2017. Erratum In: PLoS One. 2018 May 14;13(5):e0197631. doi: 10.1371/journal.pone.0197631. PubMed 28708846 ↗
  • Granata A, Serrano F, Bernard WG, McNamara M, Low L, Sastry P, Sinha S. An iPSC-derived vascular model of Marfan syndrome identifies key mediators of smooth muscle cell death. Nat Genet. 2017 Jan;49(1):97-109. doi: 10.1038/ng.3723. Epub 2016 Nov 28. PubMed 27893734 ↗
09

Updates

Tracking since Sep 25, 2026
No changes since tracking began. The registry record was last updated on Feb 13, 2024, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
10

Registry details

Key details

Study ID
NCT06257004
Lead sponsor
University Hospital, Antwerp
Collaborators
University Hospital, Ghent
Responsible party
Sponsor
First posted
Feb 13, 2024
Start date
Nov 30, 2020
Primary completion
Oct 31, 2025 (estimated)
Completion
Oct 31, 2025 (estimated)
Last update
Feb 13, 2024

Study contacts

Bart Loeys, Prof,MD,PhD
Contact
bart.loeys@uantwerpen.be
++32-3-2759768
Paul Coucke, Prof,PhD,Ing
Contact
paul.coucke@ugent.be
++32-9-3323634
Bart Loeys, Prof,MD,PhD
principal investigator · University Hospital, Antwerp
Paul Coucke, Prof,MD,Ing
study chair · University Hospital, Ghent

Oversight

Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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