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RecruitingNCT05959616Updated Mar 13, 2025

Shigella Sonnei 53G Human Infection Study in Kenyan Adults

A Phase 1 interventional study of Shigella sonnei 53G and Ciprofloxacin 500 mg in Shigellosis, sponsored by University of Oxford. Recruiting at 1 site in Kenya. Open to participants aged 18 Years to 45 Years, including healthy volunteers. Per ClinicalTrials.gov, last updated 2025-03-13.

Sponsored by University of Oxford · Phase 1, Interventional, and Basic science

From the registry’s dates

  • Primary completion was expected by Apr 2026, 6 months ago, but the record still lists the study as recruiting.
  • Started Jan 2025; still recruiting 1 year 9 months later.
Phase
Phase 1
Study type
Interventional
Enrollment
70
Allocation
Non-randomized
Ages
18 Years to 45 Years
Sex
All
01

Study summary

Diarrhoea caused by Shigella (shigellosis) is of major public health importance. However, there are no licensed Shigella vaccines in routine use, with several candidates still in various stages of clinical development. Shigella human infection studies (HIS) have played a key role in vaccine development. These models also allow for the evaluation of immunity and other non-immunological parameters that are important to understand resistance and/or susceptibility to disease. This is particularly useful in individuals from endemic areas with varying levels of prior exposure and immunity to Shigella. Thus, establishing a Shigella HIS would enable the testing of interventions such as vaccines in a population that would most benefit from a subsequent vaccine and has potential to accelerate vaccine development. Here, the goal is to successfully establish a Shigella sonnei human infection model in Kenyan adults. This will be achieved by conducting dose-finding and dose verification Shigella studies that safely and reproducibly induce ≥60% attack rates. In this study, investigators aim to use Shigella HIS in healthy adults to develop a model as a platform to test vaccines, to study immune responses identifying potential correlates of infection, and non-immunological factors mediating and influencing susceptibility to disease. To achieve this, the study will be carried out in two phases over a period of 12-14 months. Phase A will enroll (N=up to 40 volunteers) and Phase B will enroll an additional (N=30 volunteers). To be eligible to receive a dose of 53G, volunteers must pass the screening visit. Investigators will vary the dose of bacteria in individuals enrolled for challenge to identify the dose needed to cause ≥60% shigellosis (attack rate) (Phase A) followed by testing and demonstrate the reproducibility of the model (Phase B). Thus, the main outcomes of the study will be: (1) optimisation of bacterial dose for infection success (≥60% attack rate); and (2) safety.

Read the detailed description

This is a Phase 1 dose finding and dose verification study which will be used to determine the dose of S. sonnei 53G that induces the primary outcome in approximately ≥60% of Kenyan adult volunteers. This study will occur in two phases, Phase A (dose-finding) with up to 40 volunteers challenged with 53G and Phase B (dose verification) with N=30 volunteers planned to be administered 53G. Based on previously published data using this model, 1,500 colony-forming units (CFU) will be the dose administered to the first cohort. Dosing of subsequent cohorts will depend on results of the previous cohort. If a lower-than-expected attack rate (AR) occurs, the dose for the next cohort will be increased by 500 CFU. Conversely, if the AR is higher than expected the dose for the next cohort will be decreased by 500 CFU. Cohorts of volunteers will continue to be challenged until either; a dose that reproducibly causes infection in at least 60% of volunteers; safety precludes continuing (>90% AR at 500 CFU) or futility (an AR of 60% is unable to be achieved, even with a 3000 CFU dose). It may take more or less than 3 dose-finding groups to find the optimal dose for which the primary outcome (shigellosis) is achieved in approximately ≥60% of the volunteers and thus the total number of volunteers enrolled in both phases may be less or more than N=60. Once the optimal dose is established in Phase A, that dose will be carried forward for verification in Phase B. For Phase B, dose verification groups of 30 volunteers (2 cohorts of 15 volunteers per cohort) will be conducted to verify the AR with the chosen dose. The dose finding and verification stages will be done in a staggered fashion in case the dose needs to be adjusted, resulting in approximately 5 cohorts to be enrolled over time. Allocation into the groups will be on "first come first served basis" with no randomization occurring for enrolment in any of the cohorts.

02

Conditions studied

  • Shigellosis

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03

In context

Dysentery, Bacillary

61 studies on the registry are indexed under Dysentery, Bacillary; 6 are open to participants now.

This study's planned enrollment of 70 is close to the median of 76 across 54 interventional studies indexed under Dysentery, Bacillary.

Browse Dysentery, Bacillary studies →

Lead sponsor

University of Oxford is the lead sponsor of 812 studies on the registry; 119 are open to participants now.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
18 Years to 45 Years
Sexes eligible
All
Accepts healthy volunteers
Yes

Go through the criteria one by one — yes, no or not sure — and take the list to your doctor or the study team. Kept in this browser only.

Inclusion criteria

  • Healthy adults between 18 and 45 years of age (inclusive) Kilifi County residents
  • Able and willing (in the Investigator's opinion) to comply with all study requirements.
  • Provide .
  • Demonstrate comprehension of the protocol procedures and knowledge of study by passing a test of understanding (pass grade 100%).
  • Use of effective method of for the entire duration of study (prior to study start and up to study completion) (women only). Female volunteers will be asked to provide their family planning records to verify. Effective contraception is defined as a contraceptive method with failure rate of less than 1% per year when used consistently and correctly, in accordance with the product label. Examples of these include: combined oral contraceptives; injectable progestogen; implants of etenogestrel or levonorgestrel; intrauterine device or intrauterine system; male partner sterilisation at least 6 months prior to the female volunteer's entry into the study, and the relationship is monogamous; male condom combined with a vaginal spermicide (foam, gel, film, cream or suppository); and male condom combined with a female diaphragm, either with or without a vaginal spermicide (foam, gel, film, cream, or suppository).
  • Willingness to participate for an inpatient stay lasting approximately 12 days or longer and an outpatient follow-up lasting about 12 months from challenge.
  • Available for all planned follow-up visits.

Exclusion criteria

Exclusion Criteria:

  • Presence of a significant medical condition (e.g., psychiatric conditions, alcohol or illicit drug abuse/dependency, or gastrointestinal disease, such as peptic ulcer, symptoms or evidence of active gastritis or gastroesophageal reflux disease, inflammatory bowel disease), or other laboratory abnormalities which in the opinion of the investigator precludes participation in the study.
  • Known illness for example those with cancer, on immunosuppressive therapy, etc.
  • Positive serology results for HIV, , or antibodies.
  • Evidence of inflammatory arthritis on exam and/or HLA-B27 positive.
  • Family history of inflammatory arthritis.
  • abnormalities in screening lab haematology or serum chemistry, as determined by PI or PI in consultation with the research monitor and Sponsor.
  • Known allergies to fluoroquinolones, β-lactams or trimethoprim-sulfamethoxazole (any of the three are exclusionary).
  • Fewer than 3 stools per week or more than 3 stools per day as the usual frequency.
  • History of diarrhoea in the 2 weeks prior to planned inpatient phase.
  • Use of antibiotics during the 7 days before receiving the challenge inoculum dosing.
  • Use of prescription and/or OTC medications that contain imodium, acetaminophen, aspirin, ibuprofen, and/or other non-steroidal anti-inflammatory drugs, during the 48 hours prior to product administration.
  • Confirmed PCR positive for SARS-COV-2 three days before challenge i.e., Day -3.
  • Use of any medication known to affect the immune function within 30 days preceding receipt of the challenge inoculum or planned use during the active study period.
  • Serologic evidence of prior S. sonnei infection as determined by ELISA.
  • A chronic disease for which doses of prescription medications are not stable for at least the past 3 months.
  • Have known immunocompromised household contacts for example those with cancer, on immunosuppressive therapy, HIV etc.
  • A clinically significant abnormality on physical examination, including a systolic blood pressure >140 mm Hg or diastolic blood pressure >90 mm Hg, or a resting pulse >100 beats/min or \<55 beats/min (\<50 beats/min for conditioned athletes).
  • Pregnant, nursing, or planning to become pregnant within 29 days of receipt of the study product.
  • In the 4 weeks following challenge, volunteer will be living with or having daily contact with elderly persons aged 70 years or more, diapered individuals, persons with disabilities, children \<2 years old, a woman known to be pregnant or nursing, or anyone with diminished immunity. This includes contact at work, home, school, day-care, nursing homes, or similar places.
  • Work in a health care setting, day care center, or as a food handler in the 4 weeks following the challenge with S. sonnei.
  • Use of any investigational drug or any investigational vaccine within 60 days preceding challenge, or planned use during the 6 months after receipt of the study agent.
  • Have received a licensed, within 28 days or a licensed inactivated vaccine within 14 days of receiving the challenge inoculum.
  • Inability to comply with inpatient rules and regulations.
  • Has any other condition that, in the opinion of the Investigator, would jeopardize the safety or rights of a volunteer (e.g., infection with another detected pathogen) or would render the volunteer unable to comply with the protocol.
  • Received blood or blood products within the past six months.
Terms in these criteria, in plain language(9)

Underlined terms in the criteria open these too. Explained by clinicaltrials.gg, not part of the registry record. The study team decides who can take part.

Informed consent

Before you join, the study team explains what taking part involves — its purpose, what happens, the risks and possible benefits — and answers your questions, so you can decide freely. Consent is usually recorded on a form (the informed consent form, ICF) signed by you or, where the law allows, by someone legally authorised to decide for you.

You can keep asking questions during the study, you are told of new information that matters, and you can choose to leave at any time.

Contraception

Ways of preventing pregnancy. “Highly effective” methods fail less than 1% of the time a year when used correctly — for example an IUD or an implant.

Criteria usually say which methods count and how long to keep using them after the last dose, sometimes for male participants too. Some studies accept a partner’s vasectomy if it was confirmed successful and that person is the participant’s only sexual partner.

Immunosuppression

A weakened immune system. It can come from an illness, such as HIV or some blood cancers, or from medicines that turn the immune system down, for example after an organ transplant or for an autoimmune disease; steroids at higher doses count.

Read whether the line is about a condition or about medicines, and which medicines and doses it means.

HIV

The human immunodeficiency virus, which weakens the immune system.

Many studies now accept people whose HIV is controlled on treatment, judged by the viral load and the CD4 count. Check the limits this study sets.

Hepatitis B tests

Hepatitis B is a virus that infects the liver. These are separate tests: HBsAg positive usually means a current infection (a recent vaccination can briefly cause it too); total anti-HBc (HBcAb) positive means an infection now or in the past; HBV DNA measures how much virus is in the blood.

Some studies accept a past infection if HBV DNA is undetectable, sometimes with antiviral medicine during the study. Check what this study allows.

Hepatitis C tests

Hepatitis C is a virus that infects the liver. An HCV antibody test can stay positive after an infection has cleared (and is occasionally positive without one); an HCV RNA test shows whether the virus is there now.

After treatment, hepatitis C counts as cured when HCV RNA is still undetectable 12 weeks or more after the treatment ended. Studies often accept people cured this way.

Clinically significant

Judged by the study doctor to matter for your health or for the study. It is a doctor’s decision, so ask the study team if you are unsure whether something counts.

Investigational drug or device

A drug or device being studied in a clinical trial.

It may be new, or already approved and being studied for another use, dose or form. Criteria often leave out people who took part in another study of one within a recent period, commonly 30 days or five half-lives.

Live vaccines

Vaccines made with a weakened form of the germ, such as measles–mumps–rubella (MMR), chickenpox and yellow fever. They can be risky when the immune system is weakened. Flu injections are not live; the nasal flu spray is.

05

Study design

Phase
Phase 1
Primary purpose
Basic science
Allocation
Non-randomized
Intervention model
Sequential assignment
Masking
None (open label)
Enrollment
70 participants (estimated)

Study arms

  • Experimental
    Group 1 Shigella sonnei 53G 1500CFU (N=10)

    Dose finding group Group 1 will receive lyophilised S. sonnei 53G strain at a dose of 1500CFU. Group 1 will receive curative treatment of Ciprofloxacin.

    Biological: Shigella sonnei 53G · Drug: Ciprofloxacin 500 mg

  • Experimental
    Group 2 Shigella sonnei 53G 2000CFU (N=10)

    Dose finding group Group 2 will receive lyophilised S. sonnei 53G strain at a dose of 2000CFU. Group 2 will receive curative treatment of Ciprofloxacin.

    Biological: Shigella sonnei 53G · Drug: Ciprofloxacin 500 mg

  • Experimental
    Group 3 Shigella sonnei 53G 2500CFU (N=10)

    Dose finding group Group 3 will receive lyophilised S. sonnei 53G strain at a dose of 2500CFU. Group 3 will receive curative treatment of Ciprofloxacin.

    Biological: Shigella sonnei 53G · Drug: Ciprofloxacin 500 mg

  • Experimental
    Group 4 Shigella sonnei 53G 3000CFU (N=10)

    Dose finding group Group 4 will receive lyophilised S. sonnei 53G strain at a dose of 3000CFU. Group 4 will receive curative treatment of Ciprofloxacin.

    Biological: Shigella sonnei 53G · Drug: Ciprofloxacin 500 mg

  • Experimental
    Group 5 Shigella sonnei 53G TBDCFU (N=15)

    Dose verification group Group 5 will receive lyophilised S. sonnei 53G strain at a dose TBD. Group 5 will receive curative treatment of Ciprofloxacin.

    Biological: Shigella sonnei 53G · Drug: Ciprofloxacin 500 mg

  • Experimental
    Group 6 Shigella sonnei 53G TBDCFU (N=15)

    Dose verification group Group 6 will receive lyophilised S. sonnei 53G strain at a dose TBD. Group 6 will receive curative treatment of Ciprofloxacin.

    Biological: Shigella sonnei 53G · Drug: Ciprofloxacin 500 mg

Interventions

06

What researchers measure

Primary outcomes

  1. Number of volunteers with solicited adverse events

    Occurrence and severity of solicited adverse events (AEs) through 11 days post-challenge. Occurrence, severity, and relatedness of unsolicited AEs through 11 days post-challenge. Occurrence, severity, and relatedness of serious adverse events (SAEs) throughout the entire study. Occurrence of abnormal clinical laboratory values within 11 days post challenge. Percent of volunteers with nausea, vomiting, anorexia, abdominal pain/cramps rated as moderate to severe.

    Time frame: Through 11 days post challenge

  2. Number of volunteers with an attack rate of ≥60%

    Confirmation of the dose with an acceptable safety profile as determined by that gives an attack rate of ≥60% of shigellosis in Kenyan adults.

    Time frame: Through 11 days post challenge

Secondary outcomes

  1. Percent of volunteers with

    Maximum 24-hour stool output

    Time frame: Through 11 days post challenge

  2. Percent of volunteers shedding

    Peak shedding levels of the 53G challenge strain (CFUs/g of stool) post-challenge based on the results of quantitative cultures post-challenge

    Time frame: Through 11 days post challenge

  3. Kinetics of serum IgA and IgG antibody responses

    S. sonnei O-Ag, LPS, IpaB, and IpaC;

    Time frame: From baseline to 366 days

07

Study locations

1 of 1 sites recruiting
  • KEMRI-Wellcome Trust Research Programme
    Kilifi, 80108, Kenya
    Recruiting
    • Melissa Kapulu, PhD · Contactmkapulu@kemri-wellcome.org · +254709983463
    • Mainga Hamaluba, MD · Contact+254709983946
    • Melissa Kapulu, PhD · Principal investigator
    • Philip Bejon, PhD · Sub investigator
08

References and documents

Individual participant data

Plan to share: Yes — Within 2 years of the study completion date

Supporting information: Study protocol, Statistical analysis plan, Informed consent form, Clinical study report, Analytic code

Time frame: Within 2 years of the study completion date

No publications or documents are linked to this record.

09

Updates

Tracking since Sep 25, 2026
No changes since tracking began. The registry record was last updated on Mar 13, 2025, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
10

Registry details

Key details

Study ID
NCT05959616
Collaborators
KEMRI-Wellcome Trust Collaborative Research Program, KEMRI United States Army Medical Research Directorate-Kenya, Walter Reed Army Institute of Research (WRAIR), Naval Medical Research Center, PATH, Johns Hopkins University
Responsible party
Sponsor
First posted
Jul 25, 2023
Start date
Jan 21, 2025
Primary completion
Apr 30, 2026 (estimated)
Completion
Aug 30, 2027 (estimated)
Last update
Mar 13, 2025

Oversight

Data monitoring committee
Yes
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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