ClinicalTrials.gg
Active, not recruitingNCT05111990MAINHEALTHUpdated Apr 29, 2026

Human Milk and Its Effect on Infant's Metabolism and Infant Gut Microbiome

An observational study in Breast Milk Collection, Human Milk/Breastfeeding and Human Milk Microbiome, sponsored by University of Aarhus. Active, not recruiting at 1 site in Denmark. Open to female participants, including healthy volunteers. Per ClinicalTrials.gov, last updated 2026-04-29.

Sponsored by University of Aarhus · Observational

Study type
Observational
Model
Cohort
Time perspective
Prospective
Enrollment
168
Sex
Female
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Study summary

This protocol explains the MAINHEALTH cohort. The study examine the influence of maternal health parameters on human breast milk composition and integrates milk phenotype with infant metabolism and infant gut microbial content and metabolism.

Read the detailed description

The birth of a living human being is the result of an approximately nine-month pregnancy in which the developing foetus has taken exactly the building blocks necessary to grow and develop from its mother. However, growth and development continues in multiple dimensions at an increasing pace after birth. The nutrition in the first 1,000 days from conception to the child's 2nd birthday plays a pivotal role in shaping the future health of the child. Yet, little is known of how breast milk components vary due to maternal factors or of the biological mechanisms behind the beneficial actions of many breast milk nutrients. The investigators propose to overcome these obstacles by combining specialties to give a more complete account of what breast milk is (major and minor milk constituents and microbiota), how it affects the infants directly or indirectly through breast milk-gut microbiome interactions and by which mechanisms. In this study longitudinal samples from 200 mother-infant dyads during the first year of life across three groups of pregestational maternal BMI; normal weight (BMI 18.5-24.99), overweight (BMI 25-30), and obese (BMI >30) are collected. The samples give a comprehensive record of what the infant has ingested (milk samples) and how the infant and infant gut microbiome responds to this (infant urine and feces). Maternal diet in pregnancy and at milk sample deliveries are recorded through a 24h online food recall and diary system. Maternal health attributes will, besides BMI, be analysed through clinical blood biochemistry parameters. Follow-up samples and infant dietary intake as the infant grows allow investigating how early life diet shaped infant growth and gut colonization more long term. The investigators have formed an experienced team of scientists within metabolomics, microbiology and medicine, holding leading positions within their respective fields in Denmark. The novelty in the study is the interdisciplinarity, unique study design and the emphasis to integrate a number of dynamic measurements thereby offering the ability to identify the factors in breast milk affecting infant metabolism and gut colonization. Knowing this enable the optimization of infant formula.

The research questions asked in this project are three-fold.

  • First, the investigators want to determine the variability of breast milk nutrients by application of multi-omics (metabolomics, proteomics and glycomics). The production of human breast milk has a high maternal metabolic cost. Thus, hypothesis is that maternal health attributes (metabolic dysfunction or obesity) influence which breast milk nutrients are made available to the infant.
  • Second, the investigators want to establish the microbiome of breast milk. Maternal obesity can lead to an apparent gut microbial ecology and increases the risk of obesity for the child. Thus, the hypothesis is that maternal obesity confers distinct microorganisms to the infant.
  • Third, the investigators want to identify biological mechanisms for how breast milk nutrients are metabolised in the infants. Infants exclusively breast-feeding offer total compliance. Thus, the hypothesis is that by deconstructing breast milk components and markers of infant metabolism through comprehensive analysis of infant urine and feces, bioactivity of breast milk nutrients can be elucidated.
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Conditions studied

  • Breast Milk Collection
  • Human Milk/Breastfeeding
  • Human Milk Microbiome
  • Infant Gut Microbiome

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Keywords

  • milk metabolites, multi-omics, gut microbiome
03

In context

Breast Milk Expression

88 studies on the registry are indexed under Breast Milk Expression; 20 are open to participants now.

This study's enrollment of 168 is above the median of 71 across 36 observational studies indexed under Breast Milk Expression.

Browse Breast Milk Expression studies →

Lead sponsor

University of Aarhus is the lead sponsor of 1,300 studies on the registry; 189 are open to participants now.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
Child (0–17), Adult (18–64), Older adult (65+)
Sexes eligible
Female
Accepts healthy volunteers
Yes
Sampling method
Non-probability sample

Study population

Residence in Aarhus area is necessary and Aarhus University Hospital has to be the place of giving birth. This is due to samples being collected by midwifes during labor and when study personnel collect samples in study participants' homes.

Eligibility criteria

Inclusion Criteria related to mother:

  • Residing in Aarhus area
  • Above 18 years of age
  • above 18.5 kg/m2
  • Intention to breastfeed the first four to six months following birth
  • Be able to communicate in Danish

Exclusion Criteria related to mother:

  • Smoking
  • Multiple gestation
  • Suffering from the following chronic diseases that demands medical treatment: diabetes mellitus, celiac disease, inflammatory bowel disease (Chrohn's disease or ulcerosa colitis)
  • Taking medicaments for irritable bowel syndrome
  • Taking medicine for metabolic disorders
  • Taking medicine for psychological disorders
  • Have had gastric bypass surgery
  • Planned caesarean section
  • Received antibiotics after week 12 in their pregnancy
  • Utilizing significant amount of infant formula following birth

Inclusion Criteria related to infant:

  • Infants born after gestational age 37 weeks
  • Infants with a birth weight between 2500 g and 5000 g

Exclusion Criteria related to infant:

  • Inborn errors of metabolism
Terms in these criteria, in plain language(1)

Underlined terms in the criteria open these too. Explained by clinicaltrials.gg, not part of the registry record. The study team decides who can take part.

BMI (body mass index)

Weight in kilograms divided by height in metres squared. Example: 70 kg and 1.75 m gives 70 ÷ (1.75 × 1.75) ≈ 22.9.

What counts as overweight or obesity differs between countries (some use lower cut-offs), so go by the range the study states.

05

Study design

Observational model
Cohort
Time perspective
Prospective
Enrollment
168 participants (actual)
Patient registry
No
Biospecimen retention
Samples with dna

Groups and cohorts

  • Maternal pre-gestational BMI 18.5<25
  • Maternal pre-gestational BMI 25<30
  • Maternal pre-gestational BMI >30
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What researchers measure

Primary outcomes

  1. Metabolite profile of human milk

    Human milk metabolites by Nuclear Magnetic Resonance (NMR) spectroscopy. Data will be analysed as absolute concentrations of milk metabolites; how milk metabolite profiles are related to mother's blood chemistry, milk microbial profiles, milk oligosaccharides, infant urine metabolome, and infant fecal microbiomes will be explored using multivariate analyses.

    Time frame: Birth to 3 months

Secondary outcomes

  1. Metabolite profile of human milk by Liquid Chromatography-Mass Spectrometry (LC-MS) analysis

    Human milk metabolites by LC-MS-based metabolomics. Data will be analysed as absolute concentrations of milk metabolites; how milk metabolite profiles are related to milk microbial profiles, milk oligosaccharides, infant urine metabolome, and infant fecal microbiomes will be explored using multivariate analyses.

    Time frame: Birth to 3 months

  2. Milk proteome profile

    Human milk proteome by LC-MS-based, bottom-up proteomics. Data will be analysed as relative abundances of milk proteins.

    Time frame: Birth to 3 months

  3. Milk protein post-translational modification (PTM) profile

    Post-translational modifications of human milk proteins is analysed by LC-MS-based and 2D- gel-based proteomics. Data will be analysed as relative abundances of milk protein PTMs.

    Time frame: Birth to 3 months

  4. Milk glycome profile

    Human milk glycome by LC-MS-based glycomics. Data will be analysed as relative abundances of milk glycans.

    Time frame: Birth to 3 months

  5. Microbial structure of human milk

    Human milk microbiome by nanopore sequencing. Data will be analysed as relative abundances of bacteria from phylum to genus levels.

    Time frame: Birth to 3 months

  6. Microbial structure of infant feces

    Infant fecal microbiome by nanopore sequencing. Data will be analysed as relative abundances of bacteria from phylum to genus levels.

    Time frame: Birth to 5 years of age

  7. Microbial structure of infant oral cavity

    Oral cavity microbiome by nanopore sequencing. Data will be analysed as relative abundances of bacteria from phylum to genus levels.

    Time frame: 30 days postpartum

  8. Microbial structure of mother's skin microbiome

    Skin microbiome by nanopore sequencing. Data will be analysed as relative abundances of bacteria from phylum to genus levels.

    Time frame: 30 days postpartum

  9. Metabolite profile of infant fecal material

    Infant fecal metabolome by NMR-based metabolomics. Data will be analysed as absolute concentrations of fecal metabolites

    Time frame: Birth to 5 years of age

  10. Infant metabolism investigated by infant urine metabolomics

    Infant urine metabolome by NMR-based metabolomics. Data will be analysed as absolute concentrations of urine metabolites

    Time frame: Birth to 3 months of age

  11. Microbial structure of maternal vagina and rectum to investigate vertical transmission of bacteria to infant during birth

    Vertical transmission of microbiome from mother to infant. Vaginal and rectal microbiome by nanopore sequencing. Data will be analysed as relative abundances of bacteria from phylum to genus levels.

    Time frame: During birth

  12. Mother's 24-h dietary recall (myfood24)

    Aggregated nutrient intake data (e.g. proteins, vitamins, fibers, omega-3-fatty acids)

    Time frame: During pregnancy (Gestational age 30), 30, 60, and 90 days postpartum. In each case two times within a week (one weekday and one weekend day).

07

Study locations

1 site
08

References and documents

Publications

  • Overgaard Poulsen K, Astono J, Jakobsen RR, Uldbjerg N, Fuglsang J, Nielsen DS, Sundekilde UK. Influence of maternal body mass index on human milk composition and associations to infant metabolism and gut colonisation: MAINHEALTH - a study protocol for an observational birth cohort. BMJ Open. 2022 Nov 2;12(11):e059552. doi: 10.1136/bmjopen-2021-059552. PubMed 36323479 ↗
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Timeline

Tracking since Sep 25, 2026
ElapsedEstimatedEstimated, not yet reachedSimilar studies: half by the dot; the band is the middle halfHalf of similar studies reached it by the dot; the band is the middle half, from a quarter to three quarters

Started Jun 2019 (actual). Primary completion is estimated for Feb 2027, 92 months after the start.

Of 25 observational studies under Breast Milk Expression, half reached primary completion within 30 months of starting (the median), counting those still running; a quarter within 9 and three quarters within 44. This study's planned 92 months is above that.

How these figures are worked out, and which studies are left out of them.

Registered
Sep 24, 2021
First posted
Nov 8, 2021
StartActual
Jun 1, 2019
Primary completionEst.
Feb 28, 2027
CompletionEst.
Apr 30, 2028
Last update
Apr 29, 2026
What these dates mean
Start.
When the first participant enrolled; while estimated, when the study expects to open to recruitment.
Primary completion.
When the last participant was examined or treated to collect data for the study's main question, its primary outcome. A study that stopped early gives the date its data collection stopped.
Completion.
When the last participant's last visit took place, for every outcome, secondary ones and side effects included: the end of the study. Often later than primary completion, sometimes the same day.
Actual and Est.
Actual means the registry says the date has happened. Est. (estimated) is a date the sponsor plans or expects. It can still move, and the sponsor is expected to change it to actual once it has passed.
No changes since tracking began. The registry record was last updated on Apr 29, 2026, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
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Registry details

Key details

Study ID
NCT05111990
Responsible party
Sponsor
First posted
Nov 8, 2021
Start date
Jun 1, 2019
Primary completion
Feb 28, 2027 (estimated)
Completion
Apr 30, 2028 (estimated)
Last update
Apr 29, 2026

Study contacts

Ulrik K Sundekilde, PhD
principal investigator · University of Aarhus

Oversight

Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

Not currently enrolling

This study is active, not recruiting, as verified in Apr 2026. You cannot join it, but the record below documents what was studied.

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