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RecruitingNCT04188743DEKODONUpdated Sep 19, 2024

Decolonization of Gram-negative Multi-resistant Organisms (MDRO) with Donor Microbiota (FMT)

A Phase 2/3 interventional study of Allogenic FMT and Autologous FMT in Resistance Bacterial, sponsored by University Hospital, Ghent. Recruiting at 1 site in Belgium. Open to participants aged 18 Years and older. Per ClinicalTrials.gov, last updated 2024-09-19.

Sponsored by University Hospital, Ghent · Phase 2/3, Interventional, and Treatment

From the registry’s dates

  • Primary completion was expected by Dec 2025, 9 months ago, but the record still lists the study as recruiting.
  • Started Dec 2019; still recruiting 6 years 9 months later.
Phase
Phase 2/3
Study type
Interventional
Enrollment
150
Allocation
Randomized
Ages
18 Years and older
Sex
All
01

Study summary

Colonization by Multiple Drug Resistant Organisms (MDROs) during patient hospitalization requires expensive isolation measures and renders the return or transfer to other departments or institutions often impossible. Currently there is no specific treatment available. Patients have to wait for spontaneous clearance which can take months or does not happen at all.

The study will test the effect of Fecal Microbiota Transfer (FMT) on gut MDRO colonization. The focus will be on patients with a long-term colonization by Gram-negative bacteria for which isolation is warranted. Participants will be randomized into two treatment groups; allogenic FMT versus autologous FMT. A third group of participants will be monitored but will not receive an FMT. Decolonization rate will be compared one month after treatment. Additionally gut microbial composition will be studied up to one year after FMT.

Read the detailed description

This double-blind controlled randomized study will test the efficacy of Fecal Microbiota Transfer (FMT) on gut Multiple Drug Resistant Organism (MDRO) colonization.

Participants:

The study targets hospitalized patients (>18 years old) that need to stay in isolation because of colonization by Carbapenem-resistant Enterobacteriales (CRE), non-E. coli Enterobacteriales that produce extended spectrum beta-lactamase (ESBL) or Multi Drug Resistant (MDR) Pseudomonas and MDR Acinetobacter species. Participants will be randomized in two groups (allogenic and autologous FMT). Additionally a third group of participants will be monitored without intervention.

Treatment:

Participants in the allogenic FMT- group will receive treatment using healthy donor microbiota preferably through naso-duodenal/-jejunal administration (Cortrak). Donor material will be supplied by the Ghent Stool Bank. The colonization status will be monitored on a regular basis (at least once per week) by culturing fecal swabs. Additionally fecal samples will be taken on fixed time points for microbial composition analysis (16S ribosomal ribonucleic acid metagenomics).

Controls:

Participants in the autologous FMT-group will will receive an FMT with their own microbiota to account for the effects of the intervention itself. Participants in the "no intervention" group will not receive an FMT. Both control groups will be monitored and sampled identically to the allogenic FMT-group.

Outcome:

The primary outcome (MDRO-decolonization rate in treatment versus control) will be evaluated 1 month after FMT. Secondarily, safety and tolerability of the treatment will be assessed. The patients will be monitored up to 1 year after treatment to evaluate microbiome composition and to define parameters in the microbiome that are associated with clinical outcome.

02

Conditions studied

  • Resistance Bacterial

Keywords

  • Fecal Microbiota Transplantation
  • Hospitals, Isolation
  • Drug Resistance, Multiple, Bacterial
  • Gram-Negative Bacteria
  • Gastrointestinal Microbiome
03

In context

Lead sponsor

University Hospital, Ghent is the lead sponsor of 665 studies on the registry; 156 are open to participants now.

Of its 5 completed or terminated interventional studies of FDA-regulated products, 4 (80%) have results posted.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
18 Years and older
Sexes eligible
All
Accepts healthy volunteers
No

Inclusion criteria

  • Participants must be at least 18 years of age, and must sign the 'informed consent' form and thus agree with the data collection, sampling and FMT.
  • At least 2 consecutive confirmations of MDRO colonization in faeces, which complicate the necessary follow-up and/or therapy for the patient.
  • Participants must be able to endure the treatment (evaluated by treating physician).

Exclusion criteria

Exclusion Criteria:

  • Inflammatory bowel disease (Crohn's disease, ulcerative colitis ...)
  • Diagnosed hereditary blood disease (Haemophilia, Von Willebrand ...)
  • Chronic liver disease
  • Active drug use or alcohol abuse / dependence, which according to the researchers' opinion may interfere with the patient's participation in the study
  • Simultaneous use of probiotics (except yoghurt)
  • Existing immune deficiency (congenital or acquired), or concomitant immunomodulatory treatment (including systemic corticosteroids) in the 12 weeks prior to randomization, nasal or inhaled corticosteroid use is permitted
  • Positive pregnancy test (or potentially pregnant)
  • Breastfeeding
  • Severe food allergy (anaphylaxis, urticarial)
  • Antibiotic treatment up to 7 days before FMT, or planned to start within one month after FMT.
05

Study design

Phase
Phase 2 / Phase 3
Primary purpose
Treatment
Allocation
Randomized
Intervention model
Parallel assignment
Masking
Quadruple (Participant, Care provider, Investigator, Outcomes assessor)
Enrollment
150 participants (estimated)

Study arms

  • Experimental
    Allogenic FMT

    Participants in the allogenic FMT- group will receive FMT-treatment using healthy donor microbiota supplied by the Ghent Stool Bank. The donor stool (50g) is processed shortly after production and tested intensively. It's frozen at -80°C until administration via naso-duodenal/-jejunal tube (Cortrak).

    Biological: Allogenic FMT

  • Placebo comparator
    Autologous FMT

    Participants in the autologous FMT- group will receive FMT-treatment using their own microbiota to account for effects due to the treatment itself. Their stool is processed as close to the treatment as feasible. It's processed and frozen at -80°C until administration via naso-duodenal/-jejunal tube (Cortrak).

    Biological: Autologous FMT

  • No intervention
    No intervention

    Participants in the "No intervention"-group will not receive any treatment but will be monitored similarly as the "Allogenic FMT" and "Autologous FMT" groups.

Interventions

  • BiologicalAllogenic FMT

    Transplantation of fecal microbiota from a donor into a recipient

    Also known as: Fecal Microbiota Transplantation with donor stool, Fecal Microbiota Transfer with donor stool

  • BiologicalAutologous FMT

    Transplantation of autologous fecal microbiota

    Also known as: Fecal Microbiota Transplantation with own stool, Fecal Microbiota Transfer with own stool

06

What researchers measure

Primary outcomes

  1. Number of participants with decolonization success/failure

    These participants were screened positive for MDRO's in stool cultures before treatment and monitored at least once per week up to 1 month after treatment. "Decolonization" = 3 consecutive negative cultures in minimal time span of 2 weeks.

    Time frame: 1 month after treatment

Secondary outcomes

  1. Side effects

    Monitor adverse events

    Time frame: up to 1 year after treatment

  2. Treatment effect on microbial community in participants

    Evaluation of gut bacterial composition changes in participants over time pre- and post-treatment with 16S ribosomal ribonucleic acid based metagenomic analysis.

    Time frame: up to 1 year after treatment

  3. Treatment tolerability

    The tolerability of the treatment is monitored with an in-house developed questionnaire considering the participant's opinion before, during and after the treatment on a score of 1 (very bad) to 5 (very good).

    Time frame: 1 month after treatment

07

Study locations

1 of 1 sites recruiting
08

References and documents

Individual participant data

Plan to share: Yes — Participant data will be pseudonymized, not traceable to participant identity except for clinical staff. All participant data, questionnaires, colonization and sequencing data annotation will be collected in "open REDCap" (TLS encrypted secure web platform) to ensure traceability and safekeeping of the data. Data is stored and backed-up for at least 20 years on a secured server. Following data will be shared with other researchers: * baseline characteristics (age, BMI, sex...) * colonization status * analyzed gut microbial sequencing data * clinical follow-up data

Supporting information: Study protocol, Sap

No publications or documents are linked to this record.

09

Updates

Tracking since Sep 25, 2026
No changes since tracking began. The registry record was last updated on Sep 19, 2024, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
10

Registry details

Key details

Study ID
NCT04188743
Lead sponsor
University Hospital, Ghent
Collaborators
Research Foundation Flanders
Responsible party
Sponsor
First posted
Dec 6, 2019
Start date
Dec 18, 2019
Primary completion
Dec 30, 2025 (estimated)
Completion
Dec 30, 2025 (estimated)
Last update
Sep 19, 2024

Study contacts

Bruno Verhasselt, Prof. Dr.
Contact
bruno.verhasselt@uzgent.be
+3293322226
Hannelore Hamerlinck, Master
Contact
hannelore.hamerlinck@uzgent.be
+3293323637
Bruno Verhasselt, Prof. Dr.
principal investigator · University Hospital, Ghent

Oversight

Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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