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RecruitingNCT07512921BIOMATCHUpdated Apr 6, 2026

Matching Primary Tumor and Blood Gene Expression Analysis of HPV-negative Squamous Head and Neck Cancers

An observational study in Head and Neck (HNSCC), sponsored by Fondazione IRCCS Istituto Nazionale dei Tumori, Milano. Recruiting at 2 sites in Italy. Open to participants aged 18 Years and older. Per ClinicalTrials.gov, last updated 2026-04-06.

Sponsored by Fondazione IRCCS Istituto Nazionale dei Tumori, Milano · Observational

From the registry’s dates

  • Started Feb 2025; still recruiting 1 year 8 months later.
Study type
Observational
Model
Cohort
Time perspective
Prospective
Enrollment
300
Ages
18 Years and older
Sex
All
01

Study summary

The goal of this observational study is to learn whether a blood test can show the same biological features as the tumor in people with head and neck cancer that is not caused by HPV. These cancers often have different biological types, and these types may help predict how the cancer will behave. Today, these types can only be found by studying tumor tissue. This study wants to see if a simple blood sample can give the same information.

The main questions the study aims to answer are:

  • Can a blood test identify the same tumor type that researchers find by studying tumor tissue under a microscope and through genetic testing?
  • Can these blood test results help predict how people may do after finishing treatment?

Researchers will not assign treatments. All participants will receive the treatments recommended by their own care team as part of routine care.

Participants will:

  • Give a blood sample before starting treatment.
  • Give another blood sample about 3 months after finishing treatment.
  • Allow researchers to use a sample of their tumor (already collected as part of standard care) for genetic testing.
  • Continue routine follow-up visits with their care team.

About 300 adults with locally advanced, HPV-negative head and neck cancer (affecting the mouth, throat, voice box, or hypopharynx) will take part. Only people who are receiving treatment to cure their cancer can join. People with returning cancer or cancer that has already spread cannot join.

Researchers will study:

  • Gene activity in tumor tissue
  • Gene activity in blood
  • Patterns in blood fragments and small molecules
  • Digital images of tumor samples using computer-based tools

The study will compare these different types of information to see whether a blood test can reliably show the tumor's biological type. If it can, this could make it easier to monitor the cancer after treatment and may help guide future care.

This study does not test any new drug or treatment. It collects information that may help improve care for people with HPV-negative head and neck cancer in the future.

02

Conditions studied

  • Head and Neck (HNSCC)
03

In context

Squamous Cell Carcinoma of Head and Neck

2,018 studies on the registry are indexed under Squamous Cell Carcinoma of Head and Neck; 573 are open to participants now.

This study's planned enrollment of 300 is above the median of 100 across 236 observational studies indexed under Squamous Cell Carcinoma of Head and Neck.

Browse Squamous Cell Carcinoma of Head and Neck studies →

Lead sponsor

Fondazione IRCCS Istituto Nazionale dei Tumori, Milano is the lead sponsor of 172 studies on the registry; 50 are open to participants now.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
18 Years and older
Sexes eligible
All
Accepts healthy volunteers
No
Sampling method
Probability sample

Study population

Loco-regionally advanced HPV-unrelated HNSCC adult patients amenable to treatments with curative intent.

Go through the criteria one by one — yes, no or not sure — and take the list to your doctor or the study team. Kept in this browser only.

Inclusion criteria

  • Pathologic diagnosis of HNSCC
  • Primary HNSCC arising from the following sites of head and neck: oral cavity, p16-negative oropharynx, hypopharynx, larynx
  • Stage III-IVa/b according to the eighth edition of AJCC/UICC classification
  • Treatment with curative intent
  • Unequivocal clinical and/or radiological absence of disease
  • Patient ability and availability to comply with study protocol procedures.-

Exclusion criteria

Exclusion Criteria:

  • Recurrent/ HNSCC
  • p16+ oropharyngeal squamous cell carcinoma
  • Evidence of high-risk HPV infection at tumor level
  • Cancer of unknown primary site
  • Non-squamous head and neck cancers (e.g., lymphoma, sarcoma, melanoma, salivary gland cancers)
  • Skin squamous cell carcinoma from the skin of the head and neck
  • Nasopharyngeal carcinoma
  • Sinonasal/paranasal cancers
  • Insufficient data about previous medical history.
Terms in these criteria, in plain language(1)

Underlined terms in the criteria open these too. Explained by clinicaltrials.gg, not part of the registry record. The study team decides who can take part.

Metastases

Cancer that has spread from where it began to other parts of the body. “Metastatic” cancer is cancer that has spread this way.

05

Study design

Observational model
Cohort
Time perspective
Prospective
Enrollment
300 participants (estimated)
Patient registry
No
Biospecimen retention
Samples with dna

Interventions

  • OtherStandard of Care (Investigator Choice)

    This study does not include any medical treatment or experimental therapy. The only study-specific procedures are the collection and analysis of biological samples. The intervention consists of: * Two blood draws: one before the start of routine cancer treatment and one about 3 months after treatment is completed. * Use of stored tumor tissue collected previously as part of standard medical care. * Laboratory analyses of these samples to study gene activity, DNA fragments, DNA methylation, and circulating microRNAs. * Digital analysis of tumor slides using computer-based tools to identify biological patterns. These procedures are used only to compare blood-based markers with tumor-based markers. They do not change or influence the participant's medical treatment, which is decided entirely by their usual care team.

06

What researchers measure

Primary outcomes

  1. Accuracy of a blood profile (b-OMICS) in identifying the tumor tissue subtypes (t-OMICS) in loco-regionally advanced HPV-negative HNSCC patients.

    AUROC (area under receiver operating characteristics) of b-OMICS (newly identified and developed in the current project) in diagnosing Cl2-Cl3 on t-OMICS (based on the transcriptomic model developed by De Cecco et al. Oncotarget 2015) in stage III-IVa/b (AJCC/UICC eighth edition) HPV-negative HNSCC patients treated with curative intent.

    Time frame: 6 months

Secondary outcomes

  1. OS of HPV-negative HNSCC patients based on their t-OMICS and b-OMICS.

    Overall survival (OS) stratified according to t-OMICS (Cl2-Cl3 vs. others; presence or absence of b-OMICS signature).

    Time frame: 6 months

  2. DFS of HPV-negative HNSCC patients based on their t-OMICS and b-OMICS.

    Disease-free survival (DFS) stratified according to t-OMICS (Cl2-Cl3 vs. others; presence or absence of b-OMICS signature).

    Time frame: 6 months

Other outcomes

  1. Sensitivity of a blood GE profile (b-OMICS) in identifying the digital pathology model in loco-regionally advanced HPV-negative HNSCC patients

    Sensitivity of b-OMICS (newly identified and developed in the current project) in diagnosing the digital pathology model (newly identified and developed in the current project) in stage III-IVa/b (AJCC/UICC eighth edition) HPV-negative HNSCC patients treated with curative intent

    Time frame: 6 months

  2. Specificity of a blood GE profile (b-OMICS) in identifying the digital pathology model in loco-regionally advanced HPV-negative HNSCC patients

    Specificity of b-OMICS (newly identified and developed in the current project) in diagnosing the digital pathology model (newly identified and developed in the current project) in stage III-IVa/b (AJCC/UICC eighth edition) HPV-negative HNSCC patients treated with curative intent

    Time frame: 6 months

  3. Sensitivity of a digital pathology model in identifying the t-OMICS in loco-regionally advanced HPV-negative HNSCC patients

    Sensitivity of digital pathology model (newly identified and developed in the current project) in diagnosing Cl2-Cl3 on t-OMICS (based on the transcriptomic model developed by De Cecco et al. Oncotarget 2015) in stage III-IVa/b (AJCC/UICC eighth edition) HPV-negative HNSCC patients treated with curative intent

    Time frame: 6 months

  4. Specificity of a digital pathology model in identifying the t-OMICS in loco-regionally advanced HPV-negative HNSCC patients

    Specificity of digital pathology model (newly identified and developed in the current project) in diagnosing Cl2-Cl3 on t-OMICS (based on the transcriptomic model developed by De Cecco et al. Oncotarget 2015) in stage III-IVa/b (AJCC/UICC eighth edition) HPV-negative HNSCC patients treated with curative intent

    Time frame: 6 months

  5. DFS of HPV-negative HNSCC patients based on digital pathology model.

    DFS stratified according to the newly developed digital pathology model.

    Time frame: 6 months

  6. OS of HPV-negative HNSCC patients based on digital pathology model.

    OS stratified according to the newly developed digital pathology model.

    Time frame: 6 months

07

Study locations

2 of 2 sites recruiting
08

References and documents

Individual participant data

Plan to share: Undecided

No publications or documents are linked to this record.

09

Updates

Tracking since Sep 25, 2026
No changes since tracking began. The registry record was last updated on Apr 6, 2026, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
10

Registry details

Key details

Study ID
NCT07512921
Collaborators
Azienda Ospedaliero Universitaria di Sassari, Istituto Nazionale Tumori IRCCS - Fondazione G. Pascale, Fondazione Policlinico Universitario Agostino Gemelli IRCCS, Pineta Grande Hospital, Castel Volturno (CE), Italy, Istituto Europeo di Oncologia, San Raffaele University Hospital, Italy
Responsible party
Sponsor
First posted
Apr 6, 2026
Start date
Feb 18, 2025
Primary completion
Jul 31, 2027 (estimated)
Completion
Dec 31, 2027 (estimated)
Last update
Apr 6, 2026

Study contacts

Lisa Licitra
Contact
lisa.licitra@istitutotumori.mi.it
+39 02 2390 2810
Lisa Licitra
principal investigator · Fondazione IRCCS Istituto Nazionale dei Tumori, Milano

Oversight

FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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