CClinicalTrials.gg
Status unknownNCT03873285GENODERMUpdated Apr 16, 2019

Method of Genetic Analysis in Genodermatoses

An interventional study of Genetic diagnostic by mendeliome or genome in Genodermatosis and Rare Genetic Disease With Cutaneous Expression, sponsored by Queen Fabiola Children's University Hospital. Status unknown at 1 site in Belgium. Open to participants aged Up to 18 Years. Per ClinicalTrials.gov, last updated 2019-04-16.

Sponsored by Queen Fabiola Children's University Hospital · Not applicable, Interventional, and Diagnostic

The sponsor has not verified this record recently (last verified Mar 2019), so the status shown — last known as Recruiting — may be out of date.

From the registry’s dates

  • Registered 3 months after the study started (first participant enrolled Nov 2018, registered Mar 2019).
Phase
Not applicable
Study type
Interventional
Enrollment
100
Allocation
Not applicable
Ages
Up to 18 Years
Sex
All
01

Study summary

The goal of the study is to develop a method of genetic diagnosis in two stages, by mendelioma then by genome and transcriptome on fibroblast culture, in genodermatoses and rare diseases with cutaneous expression in the child.

Read the detailed description

Interventional multicenter prospective study. Patients will be examined by a dermatologist to describe and identify the various skin lesions Collaboration with the geneticist team: clinical examination for relevant cases Patient records will be consulted. Relevant medical information, biological examinations and other complementary examinations will be studied.

A blood sample (10 ml in EDTA tube) will be collected from the patient and his/her parents to store DNA for mediome and genome.

A written parental and child consent (if age-appropriate) will be obtained and a study information sheet will be signed. They will also sign the usual genetic consent request for mendeliome, genome and transcriptome on culture of fibroblasts.

A 4 mm punch skin biopsy (healthy or damaged depending on phenotype and indication) will be performed according to the standard technique.

The fibroblast culture will be performed routinely by the Genetics Center Transcriptome will be done according to the processes set up at the Genetics Center Mendeliome analysis

  • Allow the analysis of 4000 rare disease genes
  • Will be performed according to routine analyzes of the genetics lab
  • Uses the Highlander tools (web)
  • Use of de novo filters, autosomal recessive, heterozygous compound, X linked, strong variant (LOF and canonical splice sites)
  • Use of rarer filters: exomic or gene deletion, splicing (+/- 12 base pairs around exons)
  • In unexplained severe cases, a genome supplemented with the 10Xgenomics method and a transcriptome of fibroblasts will be realized. This double strategy afford to get a genome of high interpretative quality. Genome analysis by the 10Xgenomics method (https://www.10xgenomics.com )
  • This method allows us to deconvolate haplotypes and allows the analysis of 16,000 other complementary genes and to obtain precisely defined structural variants.
  • The transcriptome will better assess the genomic effects on gene expression.
  • The genome and transcriptome will also assess the presence of deep intron mutations and their effect on splicing, and will be a sustainable resource for other long-term projects (analysis of non-coding regions, microRNAs, etc.)
02

Conditions studied

  • Genodermatosis
  • Rare Genetic Disease With Cutaneous Expression

Keywords

  • Genodermatosis
  • genetic
  • children
03

In context

Genetic Diseases, Inborn

403 studies on the registry are indexed under Genetic Diseases, Inborn; 145 are open to participants now.

This study's planned enrollment of 100 is above the median of 54 across 202 interventional studies indexed under Genetic Diseases, Inborn.

Browse Genetic Diseases, Inborn studies →

Lead sponsor

Queen Fabiola Children's University Hospital is the lead sponsor of 28 studies on the registry; 6 are open to participants now.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
Up to 18 Years
Sexes eligible
All
Accepts healthy volunteers
No

Inclusion criteria

  • Children between 0 to 18 years old
  • Presence of dermatological symptoms suggesting genodermatosis
  • Presence of systemic symptoms in an undiagnosed patient associated with dermatological manifestations suggestive of a more rare genetic disorder with cutaneous expression

Exclusion criteria

Exclusion Criteria:

  • Mosaicism
  • Neurofibromatosis, all type
  • Tuberous sclerosis
  • Ichthyosis vulgaris
  • Suspicion of somatic impairment (giant nevus)
05

Study design

Phase
Not applicable
Primary purpose
Diagnostic
Allocation
Not applicable
Intervention model
Single group
Masking
None (open label)
Enrollment
100 participants (estimated)

Study arms

  • Experimental
    Genodermatosis patients

    Children between 0 to 18 years old with the presence of dermatological symptoms suggesting genodermatosis or presence of systemic symptoms in an undiagnosed patient associated with dermatological manifestations suggestive of a more rare genetic disorder with cutaneous expression

    Genetic: Genetic diagnostic by mendeliome or genome

Interventions

  • GeneticGenetic diagnostic by mendeliome or genome

    For cases not explained by a mendeliomes: genome and transcriptome on fibroblast culture

06

What researchers measure

Primary outcomes

  1. Genetic diagnostic by mendeliome

    Proportion of patients for whom a genetic diagnosis has been established using the mendeliome method. American College of Medical Genetics and Genomics. Diagnostic variants are classified as "pathogenic" or "probably pathogenic" variants.

    Time frame: At time of clinical diagnosis of genodermatosis

Secondary outcomes

  1. Genetic diagnostic by genome

    Proportion of patients for whom a genetic diagnosis has been established using the genome method. American College of Medical Genetics and Genomics. Diagnostic variants are classified as "pathogenic" or "probably pathogenic" variants.

    Time frame: At time of clinical diagnosis of genodermatosis

  2. Genetic diagnostic by fibroblast transcriptome

    Proportion of patients for whom a genetic diagnosis has been established using the fibroblast transcriptome method. American College of Medical Genetics and Genomics. Diagnostic variants are classified as "pathogenic" or "probably pathogenic" variants.

    Time frame: At time of clinical diagnosis of genodermatosis

  3. Relevance of dermatological symptoms

    Correlation between dermatological signs and symptoms and a genetic diagnosis established by the mendelioma, genome and transcriptome method

    Time frame: At time of clinical diagnosis of genodermatosis

07

Study locations

1 of 1 sites recruiting
  • Hôpital Universitaire Des Enfants Rein Fabiola
    Brussels, 1020, Belgium
    • Deborah Salik, MD · Contact · Deborah.salik@huderf.be · 0032 2 477 31 20
    • Deborah Salik, MD · Principal investigator
    Recruiting
08

Updates

Tracking since Sep 25, 2026
No changes since tracking began. The registry record was last updated on Apr 16, 2019, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
09

Registry details

Key details

Study ID
NCT03873285
Lead sponsor
Queen Fabiola Children's University Hospital
Collaborators
Center of Human Genetics - ULB in Brussels, Interuniversity Institute of Bioinformatics in Brussels
Responsible party
Sponsor
First posted
Mar 13, 2019
Start date
Nov 27, 2018
Primary completion
Nov 2021 (estimated)
Completion
Nov 2021 (estimated)
Last update
Apr 16, 2019

Study contacts

Deborah Salik, MD
Contact
Deborah.salik@huderf.be
0032 2 477 31 20
Guillaume Smits, MD PhD
Contact
Guillaume.smits@erasme.ulb.ac.be
Deborah Salik, MD
principal investigator · Hôpital Universitaire Des Enfants Rein Fabiola

Oversight

Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

Not currently enrolling

This study is status unknown, as verified in Mar 2019. You cannot join it, but the record below documents what was studied.

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