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RecruitingNCT02779478Updated Feb 27, 2026

Evaluation Of The Lung Microbiome In NTM Bronchiectasis

An observational study in Nontuberculous Mycobacteria and Bronchiectasis, sponsored by NYU Langone Health. Recruiting at 1 site in United States. Open to participants aged 18 Years and older. Per ClinicalTrials.gov, last updated 2026-02-27.

Sponsored by NYU Langone Health · Observational

Study type
Observational
Model
Case-control
Time perspective
Prospective
Enrollment
1,000
Ages
18 Years and older
Sex
All
01

Study summary

A biomarker cohort study design is proposed to study whether specific airway microbiota alterations are associated with pulmonary Non-tuberculous mycobacteria (NTM) disease. In a cohort of 200 subjects suspected of having pulmonary NTM disease, the investigators will evaluate the airway microbiome using an aliquot of the induced sputum and upper airway samples. Since induced sputum may reflect different regions of the upper/lower airways, the investigators will evaluate the upper and lower airway microbiome in a subgroup (case-control group) of patients using samples obtained through upper airway sampling and bronchoscopy, respectively.

02

Conditions studied

  • Nontuberculous Mycobacteria
  • Bronchiectasis

Keywords

  • chronic obstructive pulmonary disease (COPD)
  • cavitary
  • nodular bronchiectatic disease
  • NTM
03

Who can participate

Ages eligible
18 Years and older
Sexes eligible
All
Accepts healthy volunteers
No
Sampling method
Probability sample

Study population

Utilizing cohorts built at NYU over the last several years, this project is uniquely positioned to investigate the microbiome signatures among subjects with NTM disease.

Inclusion criteria

  • History of pulmonary symptoms: cough, fatigue, malaise, fever, weight loss, dyspnea, hemoptysis, or chest discomfort
  • Imaging abnormalities (within 2 years): defined as nodular or cavitary opacities on chest radiograph, or a computed tomography scan that shows bronchiectasis or bronchial wall thickening with associated multiple small nodules.

Definition of NTM case:

  • Subjects that meet inclusion criteria and have culture positivity for NTM: at least two separate expectorated induced sputum samples or from one bronchoalveolar lavage (BAL) or lung biopsy

Definition of NTM control:

  • Subjects that meet inclusion criteria and have less than two separate expectorated induced sputum samples culture negative or culture negative bronchoalveolar lavage (BAL) or lung biopsy.

Exclusion criteria

Exclusion Criteria for cohort study (Aim 1-2):

  • Recent (\<1 months prior) oral antibiotic or steroid use. (Continuous treatment with macrolides and inhaled steroids are acceptable >1 month prior)
  • Recent smoking history

Exclusion Criteria for bronchoscopic study (Aims 3-4):

  • Forced expiratory volume at one second (FEV1) \< 70%of predicted.
  • Significant cardiovascular disease defined as abnormal EKG, known or suspected coronary artery disease or congestive heart failure.
  • Diabetes mellitus
  • Significant liver or renal disease
  • Severe coagulopathy (INR > 1.4, Partial Thromboplastin Time (PTT) > 40 seconds and platelet count \< 150x103 cells).
  • Pregnancy
  • Ethanol (ETOH) use of more than >6 beers or >4 mixed drinks daily
  • Lack of capacity to provide informed consent.
04

Study design

Observational model
Case-control
Time perspective
Prospective
Enrollment
1,000 participants (estimated)
Patient registry
No
Biospecimen retention
Samples with dna

Groups and cohorts

  • Positive NTM Culture

    Subjects that meet inclusion criteria and have culture positivity for NTM: at least two separate expectorated induced sputum samples or from one bronchoalveolar lavage (BAL) or lung biopsy

    Procedure: Bronchoscopy

  • Negative NTM Culture

    Subjects that meet inclusion criteria and have less than two separate expectorated induced sputum samples culture negative or culture negative bronchoalveolar lavage (BAL) or lung biopsy.

    Procedure: Bronchoscopy

Interventions

  • ProcedureBronchoscopy
05

What researchers measure

Primary outcomes

  1. Evaluation of airway microbiome in subjects with active pulmonary NTM disease and compare with controls

    Investigators will use sputum samples and brushed samples from areas of the upper airway from a cohort of 200 subjects with chronic cough and pulmonary infiltrates or airway abnormalities in whom NTM disease was suspected. Cultures positive for NTM (cases) will be compared to those with culture negatives (controls). Bacterial load by quantitative polymerase chain reaction (qPCR) will be used to characterize microbiome by high throughput sequencing looking for microbial biomarkers associated with NTM disease.

    Time frame: 4 Hours

Secondary outcomes

  1. Eating Assessment Tool (EAT-10) to evaluate the prevalence of laryngopharyngeal reflux and dysphagia/aspiration in subjects with active pulmonary NTM disease compared with controls

    Time frame: 1 Hour

  2. Laryngoscopy to calculate the Reflux finding score (RFS, a validated quantitative measurement of impact of laryngopharyngeal reflux on the upper airway in adults

    Time frame: 4 Hours

  3. Reflux Symptom Index evaluate the prevalence of laryngopharyngeal reflux and dysphagia/aspiration in subjects with active pulmonary NTM disease compared with controls

    Time frame: 1 Hour

06

Study locations

1 of 1 sites recruiting
  • New York University School of Medicine
    New York, New York 10016, United States
    • Maria Tarallo, MD · Contact · taralm01@nyumc.org
    • Adrienne Scott · Contact · scotta06@nyumc.org
    • Leopoldo Segal, MD · Principal investigator
    • Stephanie Lau, MD · Sub investigator
    • Milan Amin, MD · Sub investigator
    • David Kamelhar, MD · Sub investigator
    • Doreen Addrizzo-Harris, MD · Sub investigator
    • Katrina Bantis, MD · Sub investigator
    • Benjamin Wu, MD · Sub investigator
    • Ashwin Basavaraj, MD · Sub investigator
    Recruiting
07

Registry details

Key details

Study ID
NCT02779478
Lead sponsor
NYU Langone Health
Responsible party
Sponsor
First posted
May 20, 2016
Start date
Oct 1, 2014
Primary completion
Jul 2030 (estimated)
Completion
Jul 2031 (estimated)
Last update
Feb 27, 2026

Study contacts

Lisa Guiterrez
Contact
Lira.Gutierrez@nyulangone.org
Rosemary Schluger
Contact
Rosemary.Schluger@nyulangone.org
Leopoldo Segal, MD
principal investigator · New York University Medical School

Oversight

Data monitoring committee
Yes
FDA-regulated drug
No
FDA-regulated device
No
View the source record on ClinicalTrials.gov ↗

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