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RecruitingNCT02143830RAFAUpdated Nov 12, 2025

HSCT for Patients With Fanconi Anemia Using Risk-Adjusted Chemotherapy

A Phase 2 interventional study of Busulfan and Cyclophosphamide in Fanconi Anemia, Severe Marrow Failure and Myelodysplastic Syndrome (MDS), sponsored by Children's Hospital Medical Center, Cincinnati. Recruiting at 3 sites in United States. Open to participants aged 3 Months and older. Per ClinicalTrials.gov, last updated 2025-11-12.

Sponsored by Children's Hospital Medical Center, Cincinnati · Phase 2, Interventional, and Treatment

Phase
Phase 2
Study type
Interventional
Enrollment
70
Allocation
Non-randomized
Ages
3 Months and older
Sex
All
01

Study summary

The purpose of this study is to determine whether the use of lower doses of busulfan and the elimination of cyclosporine will further reduce transplant-related side effects for patients with Fanconi Anemia (FA). Patients will undergo a transplant utilizing mis-matched related or matched unrelated donors following a preparative regimen of busulfan, fludarabine, anti-thymocyte globulin and cyclophosphamide.

Read the detailed description

The trial proposed is a three arm phase II treatment protocol designed to investigate the safety and efficacy of risk-adjusted chemotherapy-based cytoreductive regimen plus a CD34+ selected T-cell depleted peripheral blood stem cell (PBSC) stem cell transplant for the treatment of patients with Fanconi anemia and severe hematologic disease. Candidates for this trial will include patients with Fanconi anemia presenting with severe marrow failure (transfusion dependent) or myelodysplastic syndrome, or acute myelogenous leukemia for whom an allogeneic stem cell transplant is indicated.

02

Conditions studied

  • Fanconi Anemia
  • Severe Marrow Failure
  • Myelodysplastic Syndrome (MDS)
  • Acute Myelogenous Leukemia (AML)

Keywords

  • marrow aplasia
  • cytopenia
  • myelodysplasia
  • AML
  • bone marrow transplant
  • cytoreductive regimen
  • T-cell reduction
03

In context

Fanconi Anemia

98 studies on the registry are indexed under Fanconi Anemia; 20 are open to participants now.

This study's planned enrollment of 70 is above the median of 20 across 59 interventional studies indexed under Fanconi Anemia.

Browse Fanconi Anemia studies →

Lead sponsor

Children's Hospital Medical Center, Cincinnati is the lead sponsor of 661 studies on the registry; 134 are open to participants now.

Of its 54 completed or terminated interventional studies of FDA-regulated products, 30 (56%) have results posted.

Counted across the registry records on this site, refreshed daily.

04

Who can participate

Ages eligible
3 Months and older
Sexes eligible
All
Accepts healthy volunteers
No

Inclusion criteria

  • Patients must have a diagnosis of Fanconi anemia
  • Patients must have one of the following hematologic diagnoses:

    1. Severe Aplastic Anemia (SAA), with bone marrow cellularity of \<25% OR Severe Isolated Single Lineage Cytopenia and at least one of the following features:

      1. Platelet count \<20 x 109/L or platelet transfusion dependence*
      2. ANC \<1000 x 109/L
      3. Hgb \<8 gm/dl or red cell transfusion dependence*
    2. Myelodysplastic Syndrome (MDS) (based on WHO or IPSS Classification
    3. Acute Myelogenous Leukemia (untreated, in remission or with refractory or relapsed disease)
  • Donors will be either human leukocyte antigen (HLA) compatible unrelated or HLA-genotypically matched related donors (no fully matched sibling donor).
  • Patients and donors may be of either gender or any ethnic background.
  • Patients must have a Karnofsky adult, or Lansky pediatric performance scale status > 70%.
  • Patients must have adequate physical function measured by:

    1. Cardiac: asymptomatic or if symptomatic then 1) left ventricular ejection fraction (LVEF) at rest must be > 50% and must improve with exercise or 2) Shortening Fraction > 29%
    2. Hepatic: \< 5 x upper limit of normal (ULN) alanine transaminase (ALT) and \< 2.0 mg/dl total serum bilirubin.
    3. Renal: serum creatinine \<1.5 mg/dl or if serum creatinine is outside the normal range, then CrCl > 50 ml/min/1.73 m2
    4. Pulmonary: asymptomatic or if symptomatic, DLCO > 50% of predicted
  • Each patient must be willing to participate as a research subject and must sign an informed consent form.
  • Female patients and donors must not be pregnant or breastfeeding at the time of signing consent. Women must be willing to undergo a pregnancy test prior to transplant and avoid becoming pregnant while on study.

Exclusion criteria

Exclusion Criteria:

  • Active CNS leukemia
  • Female patients who are pregnant (positive serum or urine HCG) or breast-feeding.
  • Active uncontrolled viral, bacterial or fungal infection
  • Patient seropositive for HIV-I/II; HTLV -I/II
05

Study design

Phase
Phase 2
Primary purpose
Treatment
Allocation
Non-randomized
Intervention model
Parallel assignment
Masking
None (open label)
Enrollment
70 participants (estimated)

Study arms

  • Experimental
    Arm A: Good Risk Patients

    Patients 18 years old or younger with marrow aplasia or single lineage cytopenias will be receive intravenous busulfan (4 doses x 2 days), cyclophosphamide (4 doses x 4 days) and fludarabine (4 doses x 4 days), as used in our most current study that led to \> 90% survival rates . Busulfan pharmacokinetics will not be used. All patients will receive rabbit ATG (4 doses x 4 days) prior to and granulocyte-colony stimulating factor (G-CSF) after transplant to promote engraftment. Cyclosporine will not be used for GVHD prophylaxis. The source of the stem cells for all patients will be peripheral blood stem cells mobilized by treatment of the donor with G-CSF. T-cell depletion will be performed by positive CD34 selection with the use of the Miltenyi system (CliniMACS device). Enrollment on this arm will include up to 50 patients.

    Drug: Busulfan · Drug: Cyclophosphamide · Drug: Fludarabine · Drug: rabbit ATG · Drug: G-CSF · Biological: Peripheral blood stem cell

  • Experimental
    Arm B: Intermediate Risk Patients

    Patients 18 years old or younger with MDS or AML will receive intravenous busulfan (4 doses x 2 days), cyclophosphamide (4 doses x 4 days) and fludarabine (4 doses x 4 days). Busulfan pharmacokinetics will be used in this arm, as the dose of busulfan is higher. All patients will receive rabbit ATG (thymoglobulin) (4 doses x 4 days) prior to and G-CSF post transplant to promote engraftment. Cyclosporine will not be used for prophylaxis against GVHD. The source of the stem cells for all patients will be peripheral blood stem cells induced and mobilized by treatment of the donor. T-cell will be performed by positive CD34 selection with the use of the Miltenyi system (CliniMACS device). The maximum number of patients enrolled in this arm will be 10.

    Drug: Busulfan · Drug: Cyclophosphamide · Drug: Fludarabine · Drug: rabbit ATG · Drug: G-CSF · Biological: Peripheral blood stem cell

  • Experimental
    Arm C: High Risk Patients

    Patients 19 years old or older with marrow aplasia or MDS or AML will receive intravenous busulfan (4 doses x 2 days), cyclophosphamide (4 doses x 4 days) and fludarabine (4 doses x 4 days). In this study, we will test whether outcomes can be improved, yet engraftment maintained, with a slightly reduced dose of busulfan. Patients will receive rabbit ATG (4 doses x 4 days) prior to and G-CSF post transplant to promote engraftment. Cyclosporine will not be used for GVHD prophylaxis. The source of the stem cells will be peripheral blood stem cells collected from donors treated with G-CSF. T-cell depletion will be performed by positive CD34 selection with the use of the Miltenyi system (CliniMACS device). The maximum number of patients enrolled will be 10.

    Drug: Busulfan · Drug: Cyclophosphamide · Drug: Fludarabine · Drug: rabbit ATG · Drug: G-CSF · Biological: Peripheral blood stem cell

Interventions

  • DrugBusulfan

    A standard dose of busulfan, associated with excellent outcomes in our previous trial will be used for young patients with marrow aplasia (arm A). A higher dose of busulfan will be used in younger patients with MDS and AML (arm B) to maximize disease control. A lower dose of busulfan will be used in older patients (arm C) to minimize toxicity.

    Also known as: Myleran, Busulfex IV

  • DrugCyclophosphamide

    Arms A, B and C - Cytoxan will be given as a 1-2 hour infusion for 4 days. The dose will be adjusted according to patients ideal body weight for obese patients.

    Also known as: Cytoxan

  • DrugFludarabine

    Arms A, B and C - Fludarabine will be given IV over 30 minutes daily for 4 days. The dose will be adjusted according to renal function according to Institutional guidelines.

    Also known as: Fludara

  • Drugrabbit ATG

    Arms A, B and C - 4 doses will be given prior to transplant to promote engraftment.

    Also known as: thymoglobulin

  • DrugG-CSF

    All patients will also receive G-CSF post-transplant to foster engraftment.

    Also known as: Granulocyte colony-stimulating factor, filgrastim, neupogen

  • BiologicalPeripheral blood stem cell

    The source of stem cells for all patients will be peripheral blood stem cells (PBSC) induced and mobilized by treatment of the donor with G-CSF for 4-6 days. T-cell depletion will be uniformly performed by positive CD34 selection with the use of the Miltenyi system (CliniMACS device).

06

What researchers measure

Primary outcomes

  1. Graft Failure or Rejection

    Primary non-engraftment is diagnosed when the patient fails to achieve an ANC \>=500/mm3 at any time in the first 28 days post-transplant. If (1) after achievement of an absolute neutrophil count (ANC) \>=500/mm3, the ANC declines to \<500/mm3 for more than 3 consecutive days in the absence of relapse, or, (2) there is absence of donor cells in the marrow and/or blood as demonstrated by chimerism assay in the absence of relapse, a diagnosis of secondary graft failure is made. The patient is not evaluable for graft failure or rejection if recurrence of host MDS is detected concurrently.

    Time frame: 5 years

Secondary outcomes

  1. Post-transplant severe morbidity and mortality

    The occurrence of severe post-transplant regimen-related severe morbidity (grade IV toxicity) and/or mortality will be the second endpoint of this study. In the context of the agents or agent-combination used for cytoreduction used, particular attention will be given to toxicity involving (1) the liver, (2) the lungs, (3) the oral mucosa and gastrointestinal tract, and (4) the central nervous system.

    Time frame: 2 years post-transplant

Other outcomes

  1. Graft Versus Host Disease

    Patients will be observed for acute and/or chronic graft versus host disease (GvHD). Standard clinical criteria for the grading of acute and chronic GvHD will be done according to IBMTR guidelines.

    Time frame: One year

  2. Leukemic Relapse

    For patients with MDS or AML, relapse will be analyzed as to type and genetic origin of the MDS/leukemic cells.

    Time frame: 5 years

  3. Secondary malignancies

    Patients will be followed for 5 years through annual contact with their treatment center in order to track the risk of developing a secondary malignancy.

    Time frame: 5 years

07

Study locations

2 of 3 sites recruiting
  • Memorial Sloan Kettering Cancer Center
    New York, New York 10174, United States
    Completed
  • Cincinnati Children's Hospital Medical Center
    Cincinnati, Ohio 45229, United States
    • Parinda Mehta, MD · Principal investigator
    Recruiting
  • Fred Hutchinson Cancer Research Center
    Seattle, Washington 98109, United States
    • Sheri Ballard · Contact · sballard@fredhutch.org · 206-667-4222
    • K. Scott Baker, MD · Principal investigator
    Recruiting
08

Updates

Tracking since Sep 25, 2026
No changes since tracking began. The registry record was last updated on Nov 12, 2025, before this site started recording changes on Sep 25, 2026. Its history is on ClinicalTrials.gov ↗
09

Registry details

Key details

Study ID
NCT02143830
Lead sponsor
Children's Hospital Medical Center, Cincinnati
Collaborators
Memorial Sloan Kettering Cancer Center, Fred Hutchinson Cancer Center
Responsible party
Sponsor
First posted
May 21, 2014
Start date
Apr 2014
Primary completion
Dec 2026 (estimated)
Completion
Dec 2028 (estimated)
Last update
Nov 12, 2025

Study contacts

Jamie Wilhelm
Contact
Jamie.Wilhelm@cchmc.org
(513)803-1102
Sara Loveless, RN
Contact
Sara.Loveless@cchmc.org
(513)803-7656
Parinda Mehta, MD
principal investigator · CCHMC

Oversight

Data monitoring committee
Yes
View the source record on ClinicalTrials.gov ↗

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